Salpingoeca rosetta: PTSG_07055 Help Entry PTSG_07055        CDS       T04136                                  Name (RefSeq) uncharacterized protein   KO K03130   transcription initiation factor TFIID subunit 5 Organism sre  Salpingoeca rosetta Pathway sre03022   Basal transcription factors Brite KEGG Orthology (KO) [BR:sre00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     PTSG_07055  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sre03021]     PTSG_07055    03036 Chromosome and associated proteins [BR:sre03036]     PTSG_07055 Transcription machinery [BR:sre03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIID      PTSG_07055    Coactivators     SAGA/TFTC/STAGA complex      PTSG_07055 Chromosome and associated proteins [BR:sre03036]  Eukaryotic type   Histone modification proteins    HAT complexes     PCAF complex      PTSG_07055     STAGA complex      PTSG_07055     TFTC complex      PTSG_07055     SAGA complex      PTSG_07055     SLIK complex      PTSG_07055 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st TFIID_NTD2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_Vps41 WD40_like PEP5_VPS11_N Vfa1 RAB3GAP2_N WD_LRWD1 CDC45 Motif Other DBs NCBI-GeneID:  16073033 NCBI-ProteinID:  XP_004992467 UniProt:  F2UDX2 LinkDB All DBs Position Unknown AA seq 695 aa AA seqDB search MTTPGGEERVSDADVERVVWQYFRQKNYKHALEGLVKDAASLPFARLDEGEEAPETFIKN ELAAVVHLTKWIANSLDLYKNELNTVTYPVFVHCYLDLLYRGYDEAAKQFMLDYHHHHRD LHDLELQQIMAVTSLEHMKTNDTVRMFRANKYKVHLCNYSWELLLGFVQEHKYNFLLRII NQHLSITFHTGKPSQRIDVGTIGHAVGSVDQLNSIKVYWGTYQVVEDPDEMEGEGMDTAD DAGEGEGKSEAGGEQAAKKAKTGAGDKGKDKEGDRGKSKAAEDEDEDAEGEEGAKRRRQR KKQQDHPDAPPEEMRLKHPPIRGRMLQMRLEAMRDARRRAALSAKNLPSCCAYTFFNALK SVAITCISFSVDSKLIATGCADSSVRVWTLTKDKLMKLLPGTKLAGFDVTATSKLEDYLD PSTASAAKVMRGHSGPVTCVNFSPDNLFLISSSTDHTIRLWSLLTYTNVVCYRGHSYPVW HVEFSPLNLYFATASFDHTARLWSTDQVYTKRVFAGHLSDVNCVKFHPNCNYLATASTDK SCRLWDIQSGSCVRVFQGHRDTVHVLEFTHDGRFLASGGDDWDIMIWDLASGCRVKVLHG HSDVVYSLAFSQEDGVLASGGADNTVRVWDCEFLQSAAQATTTLHDAPDTLQPGDASPEL AATYYTKATPVYAVHFGSTNYLLAAGVFVPNPDKH NT seq 2088 nt NT seq  +upstreamnt  +downstreamnt atgacgacgccaggaggggaagagcgggtgtccgacgccgacgtggaacgcgttgtgtgg caatacttcagacaaaagaactacaaacatgcgctggaagggctggtcaaggatgcagcg tctttgccatttgccaggctcgatgaaggagaagaggcaccggaaacctttatcaagaac gaattggcggccgttgtccacctgacaaagtggattgccaattcattggacttgtacaag aacgagctgaacaccgtgacctaccccgtattcgtgcactgctacctggacctgctgtat cgtggctacgacgaagccgccaagcagtttatgctggactaccaccaccaccaccgggac ttgcacgatcttgaactgcaacagatcatggccgtcacctctctcgaacacatgaagaca aacgacaccgtccgcatgttcagggcaaataaatacaaggtgcacctctgcaactactcc tgggagctgctgctggggtttgtgcaggagcacaagtacaacttcctcctgcgcatcatc aaccaacatctgtccatcaccttccacacgggaaaaccgtcacagcgcattgacgtcggc actattgggcacgccgtcggctcagtggaccagctcaacagcatcaaagtgtactgggga acataccaagtcgtcgaggatcctgatgagatggagggagaggggatggacacagcggac gacgcgggggagggcgaagggaagagcgaagcaggtggtgaacaggcagcaaagaaggca aaaacaggcgcaggggacaaagggaaggataaggagggggacagggggaagtcgaaagcc gcggaggatgaagacgaagacgcagaaggagaagaaggcgcaaagcggcggcgacagcgc aagaagcagcaggaccacccggacgccccacccgaggaaatgcgactcaagcatccacca atccgtggccggatgctgcagatgcgactggaagcgatgcgtgacgcccgccgtcgcgcc gccctctctgcaaagaaccttccatcctgctgtgcttacactttcttcaacgctctcaag tcggtcgcgatcacgtgcatttcattctctgttgacagcaagctgattgccacgggctgc gctgacagctctgtgcgcgtgtggaccctcaccaaggacaagctcatgaagctgctcccc ggcacaaaactcgccggctttgacgttacagcgacaagcaagctcgaggactatctggac ccgtcgacggcgtcggcagcgaaggtgatgcgtgggcactcggggccggtcacgtgcgtc aacttcagcccagacaacctcttcctcatctcatcctccacagaccacacgatccgcctg tggagtttgctgacatacacgaacgtggtgtgctaccgcggccacagctatcccgtgtgg cacgtcgagttcagcccgctcaacctgtactttgcgacggcgagctttgaccacacggca cggctctggtccaccgaccaggtctacaccaaacgggtcttcgcaggccacctctcagat gtgaactgtgtcaagttccaccccaactgcaactacctcgcaacggcgtccacagacaag tcgtgccgcctctgggacattcagtccgggtcgtgtgtccgcgtcttccagggccaccgc gataccgttcacgtgctcgagtttacacacgatggccgcttcctcgcatcgggaggcgac gattgggacattatgatttgggatcttgcgagcggctgtcgcgtcaaagtcttgcacggc cacagcgacgtcgtgtactcgctcgcattcagtcaggaagatggcgtgcttgcgagcggg ggcgcagacaataccgtgcgcgtgtgggactgtgagttcttgcagtccgcggcccaggct acgaccacgctccacgatgcacctgacacgctgcagccaggggatgcgtcgcctgagctt gcagcgacgtactacaccaaggcgacgcccgtgtacgcggtgcactttggatcaaccaac tacctccttgctgctggcgtgttcgttccaaacccagacaagcactga

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