Salpingoeca rosetta: PTSG_07107
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Entry
PTSG_07107 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14304
nuclear pore complex protein Nup85
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_07107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_07107
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_07107
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_07107
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PTSG_07107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF2326
Motif
Other DBs
NCBI-GeneID:
16073093
NCBI-ProteinID:
XP_004992524
UniProt:
F2UE29
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MNAQPSTVQRTLQRDFRVTFEDLIGVVESGSISSDQLAEFSQRFQQSLRDATALTTSPNA
NVSEQEAQRIAAMYRCWHLCDIFFTRGDSISKMGGFVLGELLKWSAEHFAEADRHRLDLV
RCKSNFDEHPSFWPAVVHLVCQGRMKEASQLLQLHSRYPRDEMVTNAVRTVEELTRRMPV
YHPGTSRTEFMGKWQTWHKHVLDRTADITDPHLALIARLFKGDDDAFQTLIDKYRMHWME
VLIARILFTAPTIVLVDMHAHLQAAAERCAWVDEYDLLSVVISGDAHTVLEQARDEFGTC
MFSVHLLIFLSQTNWLADGAEQDAEYYLLEYGQEFIDQHNWTGAGSYLSSRCGEEGLRRL
EKKLLSVTMRTEKCATQVWRCCLQYHLNAAAAQVCRVFGQKLQREGKPVSAITWFIRGGA
TDELTRSLADDVLLRYARTHDAAELAVAQQFTQAAGRCQRLQFAAKYKDICDHVQSGNFA
HASGAVIEILTETTLAPKWFWVHVLIDMLPLLEHDDVLFSSFDTRSLIQCLEEVELSHCR
DEYMQTIAHKYMKRSRARNAEDEVEKIRMALARNLARSLLVQAPA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcagccaagcactgtgcagcgcacgctgcaacgtgacttcagagtcacgttt
gaggacctgattggtgttgtggagtcggggagcatctcctcggatcagcttgcagagttc
tcacagcggttccagcagtctctccgcgatgccacagcactcaccaccagtccaaacgca
aacgtctccgaacaggaggcacagcgcatcgctgccatgtacagatgttggcacttgtgt
gacatcttcttcacaaggggtgacagcatctcgaagatgggcggctttgtgcttggggaa
ctgctcaagtggagcgcagaacactttgcagaggcggaccgtcaccgccttgatctcgtt
cgctgcaagtccaactttgacgaacacccttcattctggccagcggtggtgcaccttgtg
tgccagggccgcatgaaggaggcgagccagctgctgcagctccactcgcgctacccgcgt
gacgagatggtcaccaacgcggtccgcaccgtcgaggaactcacccgtcgtatgcccgtc
taccacccaggcacctcacgcacagagtttatgggcaagtggcagacatggcacaagcac
gtgctcgacagaacagctgacataactgacccgcacctcgccctcatcgcacggctgttc
aaaggagacgacgacgccttccagacactcattgacaagtatcggatgcactggatggag
gtgctgattgcacgcatcctcttcaccgctccaacgattgtcctcgtcgacatgcacgca
cacctccaggctgcagcggagcggtgcgcgtgggtggacgagtatgatctcctcagcgtc
gtcatcagtggtgatgcgcacaccgttctcgagcaagccagagatgagtttgggacgtgc
atgttctcggtgcacctactgatcttcctgagccagacaaactggcttgcagacggcgca
gagcaggacgcagagtattatctgctggagtacgggcaggagtttattgatcagcacaac
tggaccggcgcaggctcgtatctctcaagcaggtgcggggaggaagggttgcggcgactc
gagaagaagctgctctccgtcacgatgaggacagagaagtgcgcaacacaggtgtggcgc
tgctgcttgcagtatcacctcaacgccgcagctgcgcaggtgtgccgtgtctttgggcag
aagctgcagcgggaaggaaagcccgtcagcgccatcacctggttcattcgcggcggcgca
acagatgaactcacgaggtcgctggctgacgatgtgctgctgcgatatgcgcgcacacac
gacgcggcggagctggcggtggcgcagcagtttacacaggccgccggcaggtgtcagcgg
ctccaatttgcagccaagtacaaggacatctgcgatcatgtgcaaagcggaaatttcgcg
cacgcgtcgggcgccgtcattgaaatcctcacggagaccacgctcgccccaaagtggttc
tgggtgcatgtgttgattgacatgctgccgctcctcgaacacgacgacgtcctcttctcc
tcctttgacacgcggtcgctgattcagtgcctggaggaagtggagctgtcacactgccgc
gatgaatacatgcagacaatcgcacacaagtacatgaagcgttctcgtgctcgcaatgct
gaggatgaggttgagaagatcagaatggcgctggcacgaaacttggcaagatcactcctc
gttcaggcaccagcatga
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