Salpingoeca rosetta: PTSG_07151
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Entry
PTSG_07151 CDS
T04136
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
sre
Salpingoeca rosetta
Pathway
sre03030
DNA replication
sre03410
Base excision repair
sre03420
Nucleotide excision repair
sre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTSG_07151
03410 Base excision repair
PTSG_07151
03420 Nucleotide excision repair
PTSG_07151
03430 Mismatch repair
PTSG_07151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sre03032
]
PTSG_07151
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_07151
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_07151
DNA replication proteins [BR:
sre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PTSG_07151
DNA Replication Termination Factors
ELG1-RFC complex
PTSG_07151
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PTSG_07151
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PTSG_07151
Check point factors
HRAD17(Rad24)-RFC complex
PTSG_07151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
AAA_22
Rad17
Rep_fac_C
RuvB_N
AAA_16
Mg_chelatase
AAA_24
Motif
Other DBs
NCBI-GeneID:
16073139
NCBI-ProteinID:
XP_004992570
UniProt:
F2UE75
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSLWIDKYRPKQLSALSYHDGITQQLKTLASSGDVPHLLFYGPPGAGKKTRVQCFLRELY
GASTDKLKIEHRSFKATPSKTVDISTIASGYHIEINPSDVGIDDYHVVRLLLKEIASSPQ
LDTSHHAFKVVVISEADRLTRKAQQALRRIMEKYVHNCRYVLIGNSSSKILAPIRSRCLG
LRVGAPSVDELSTVLIDVGKKEGCQVMPGFAAKVANASSRNLRRALLMLEATASQSRGSK
VMEATNDIQLPDWEIFLRETAKRIISQQSPQRLLEVRQRLYELLSHCIPPDVIIKRLTEE
LIGHIDGQLKVDVIAYAADFEHRLTTGRKPIFHLEAFVARFMSVYKAYLMDLM
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtggatcgacaagtaccggccgaagcagctgtctgcgttgtcgtatcacgac
ggcatcacacaacaactcaagacattggcgtcgagcggggatgtgccacacttgctcttc
tacggccctccaggcgcaggaaagaaaacacgcgttcagtgctttcttcgcgagctctat
ggcgcctccacagataagctgaaaatcgaacaccggagcttcaaggctacacccagcaag
acagtggacatttcaacaattgccagtggctatcacattgaaatcaaccccagcgatgtg
ggcattgacgattatcacgtcgtgcggctgctgctcaaggaaattgccagctcaccacag
ctcgacaccagccaccacgcatttaaagtcgtggtcatctctgaggcagaccgcctgacg
cgaaaggcgcaacaggcgctgcgtcgcatcatggagaaatacgtccacaactgcagatat
gtcctcatcggtaacagctcaagcaagattctggcaccgattcgcagccgttgtcttggt
cttcgtgttggcgcgccgtctgtggacgagctgtccacggtgctcattgatgttggcaag
aaggaggggtgccaggtcatgccgggctttgctgcaaaggtcgcgaacgcgagcagtcga
aacctccgccgtgccctcctcatgctcgaggcaacagcttcccaatcgcgtgggtcgaag
gtgatggaggcgaccaacgacattcagctgccagactgggagattttcctgcgcgaaacg
gcaaaacggatcatctcccagcagagcccgcaacggctgcttgaagtgcgacagcggttg
tatgagctgctcagccactgcatccctccagatgtcatcatcaagcggctgactgaggag
ctgattggacacattgatgggcagctgaaggtggacgtgatcgcatatgcagcggacttt
gaacacagattaacaacgggccggaaacccattttccacctggaggcctttgtcgcccgt
ttcatgagcgtgtacaaggcatatctcatggacctcatgtag
DBGET
integrated database retrieval system
