Salpingoeca rosetta: PTSG_07169
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Entry
PTSG_07169 CDS
T04136
Name
(RefSeq) DEAD box polypeptide 47 isoform 1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_07169
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_07169
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTSG_07169
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
Helicases
PTSG_07169
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
PTSG_07169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
SCO4226-like
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
16073161
NCBI-ProteinID:
XP_004992590
UniProt:
F2UE95
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MTMVAHSLEEDEQPQEAIVESPVKDSSSPKKKKKSKKEKKDKKKKSKKSKSSKRRHSTDE
GESAVSDQESEHSAINGAAHDDSDAENHPTKKAKSTVKDDDSDDQDEEMSQVQKEGALDN
FDISDKSRNNLEKHGYKYLFPIQAKTFDLIMAGNDIFGKARTGEGKTLSFALPVIEKLLA
SPDTTRGRRPRVLVMAPTRELASQVWREFQKVGPSLASTCIYGGTDYEPQRRAFRNGLDV
VVGTPGRLMDHMESGALQLTNLQYLVLDEADRMLEVGFVDTVEKMLSMAVEQAGQKPQMI
LFSATMPPFIKSTLTKYMPEHKVVDTVGKEMNRTSTGVQHLALRCPWQARNTVIADVVQV
YSGAHGRTMIFTQTKRDANELALNDTLKQEVQVLHGDIAQKQRELSLQCFRDGKVRCLVA
TDVAARGIDIPEVDLVVQCEPPKDVESYIHRSGRTGRAGRKGTCICFYKPNQEQQLREVE
RRAGISFTRIGAPQPADIIKASARDATRFLDSVTNDVLVYFQEAAQAFIEEKGNAVDALA
AALAHISGSTTIKGRSLLSSLEGFTAFHLTTDTEIRGKAFVFSVLGHHLPREVREAVRGI
RLQKDRMGAVFDLPSSMMKTIKDNWSDTPNLRLTVAEKLPELQEEQGFGRGGFRNNGSYR
GGGYNGNRNGGFRSGGRGGGRGGGRGGFRRGGGRGGGRGGGRGGGFRRNNY
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggttgcacacagcctcgaggaagacgagcagccgcaggaggcgatcgtcgag
tccccagtcaaggactcttcctctcccaagaagaagaagaagtccaagaaggagaagaag
gacaagaagaagaagagcaagaagtctaagagctccaagcgcaggcattccaccgacgag
ggcgagtctgccgtcagcgatcaggaatcagaacactctgcaatcaacggtgcagcccac
gacgactccgatgcagagaaccaccccaccaagaaggccaagagcacagtcaaggacgac
gattctgatgaccaagacgaagagatgtctcaggttcagaaggagggtgccctggacaac
tttgacatctccgacaagtcccgcaacaaccttgagaagcacggctacaagtacctcttc
cccatccaagccaagacgtttgacctgattatggccggcaacgacatcttcggcaaggcc
cgcactggcgaaggcaagacgctgtcctttgcgctgcccgtcattgagaagctgcttgct
tcgcccgacaccacccgcggccgccgcccacgcgtcctcgtcatggccccgacccgtgag
ctcgcctcgcaggtgtggcgcgagttccagaaggttggcccttccctcgccagcacatgc
atctacggtggcacagactacgagccccagcgccgcgcattccgcaacggacttgacgtg
gttgttggcacaccgggccgcctcatggaccacatggagtctggcgccctccagctcacc
aacctccagtatcttgtgctggacgaggctgatcgcatgcttgaagtcgggtttgtggac
acggtcgagaagatgctgagcatggctgtggagcaggctggtcagaagccgcagatgatt
ctcttcagcgctaccatgcccccttttatcaagtccaccctcaccaagtacatgcccgag
cacaaggtcgtcgacacggtcggcaaggagatgaaccgtacaagcaccggcgtgcagcat
cttgcgctgcggtgcccctggcaggcgcgcaacacggtgattgccgacgttgtgcaggtg
tactctggcgcgcacggccgcacgatgatcttcacgcagacgaagcgcgacgccaatgag
ctcgccctcaacgacacactcaagcaggaagtccaggtcctccacggcgacattgcacag
aagcagcgcgagctgtcactccagtgcttccgcgacggcaaagtccgctgccttgtcgcc
acagacgtcgctgcaagaggcattgacatccccgaggttgaccttgtggtgcagtgcgaa
ccgcccaaggacgttgagtcgtacatccaccgctctggccgcacaggccgcgccggccgc
aagggcacgtgcatctgcttctacaagccaaaccaggagcagcagctgcgggaggtggag
cgccgtgcaggcatcagcttcacgcgcattggtgcgccgcagccggcggacattatcaaa
gccagtgcacgcgatgccacgcgcttcctcgacagcgtcacaaacgacgtgctcgtctac
ttccaggaggccgcacaggcgtttattgaggagaagggcaacgctgttgacgcgctggca
gccgcgctcgcacacatcagcggatcgacgaccatcaagggccgcagtcttctctcctcc
ctcgagggattcaccgccttccacctcaccacagacacggagattcgcggaaaggcattt
gtgttcagcgtgctgggccaccacctgccgcgggaggtgcgcgaggccgttcgcggtatt
cgtctccagaaggaccgcatgggcgctgtctttgacctgccatcgagcatgatgaagacg
atcaaggacaactggagcgatacccccaacctgcggctgacagtcgccgagaagttgcct
gagctgcaggaggagcagggctttggtcgcggtgggttccgcaacaacggctcatatcgt
ggcggcggctacaacggcaacaggaacggcgggttccgcagcggcggccgtggcggcgga
cgtggcggtggacgtggcggtttccgtcgtggcggtggacgcggtggtggtcgtggtggc
ggtcgtggtggcggcttccgtcgcaacaactactaa
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