KEGG   Salpingoeca rosetta: PTSG_07503
Entry
PTSG_07503        CDS       T04136                                 
Name
(RefSeq) snRNP Sm protein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
sre  Salpingoeca rosetta
Pathway
sre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTSG_07503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_07503
   03041 Spliceosome [BR:sre03041]
    PTSG_07503
   03032 DNA replication proteins [BR:sre03032]
    PTSG_07503
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PTSG_07503
Spliceosome [BR:sre03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PTSG_07503
  U2 snRNP components
    PTSG_07503
 Complex B
  U1 snRNP components
    PTSG_07503
  U4/U6.U5 tri-snRNP components
    PTSG_07503
 Complex C
  U2 snRNP components
    PTSG_07503
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PTSG_07503
SSDB
Motif
Pfam: LSM SM-ATX Hfq
Other DBs
NCBI-GeneID: 16071571
NCBI-ProteinID: XP_004991009
UniProt: F2UIX1
LinkDB
Position
Unknown
AA seq 70 aa
MSLTIKNPKQLLQELTGKSVAVKLKWGMEYRGVLKSFDNYMNFQLLNTEEYIDGVSQGNL
GECLIRAHMP
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcgttgacaatcaagaacccgaagcagctgctgcaggagctgacgggcaagtctgtt
gctgtcaagctcaagtggggcatggagtaccgtggcgttctcaagtcctttgacaactac
atgaactttcagctgctgaacacagaggagtacattgatggcgtgtctcaaggcaacctc
ggcgagtgcctgatccgtgcgcacatgccatga

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