Salpingoeca rosetta: PTSG_07865
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Entry
PTSG_07865 CDS
T04136
Name
(RefSeq) eIF-4a
KO
K03257
translation initiation factor 4A
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_07865
03012 Translation factors [BR:
sre03012
]
PTSG_07865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sre04147
]
PTSG_07865
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PTSG_07865
mRNA cycle factors
Stress granule specific factors
PTSG_07865
Translation factors [BR:
sre03012
]
Eukaryotic type
Initiation factors
eIF-4
PTSG_07865
Exosome [BR:
sre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PTSG_07865
Exosomal proteins of bladder cancer cells
PTSG_07865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-GeneID:
16072230
NCBI-ProteinID:
XP_004991669
UniProt:
F2UGJ8
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MSWNAETSDKPAAPADGPANMAPEGEIESNWNEVVDNFDDMGLKAELLRGIYSYGFERPS
AIQQRAIVPCTKGRDVIAQAQSGTGKTATFSVSVLQRIDTTRPECQALILAPTRELATQS
LDVLENLGQYMDVKTMGCIGGTRVQDDMAKLEQGVQVIVGTPGRVFHMINSGALDVSNLG
VFVLDEADEMLSFGFTDQIYDIFQTLPKDVQVILISATMPDDVLEVTKRFMRDPIRILVK
KEQLTLEGIRQFYVDVGKEDWKLETLSDIWKTITISQAVIFCNTRRKVDWLTEQLRARGH
QVSCTHGDMTQDERNMIMKEFRAGSTRVLITTDLLARGIDVQQVSLVINFDLPSNRENYL
HRIGRSGRFGRKGVAINFVAEDDVRRLKELEEFYQTQIDEMPKNVADFL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaacgctgagacctcggacaagcccgccgcccccgccgatggccccgccaac
atggcgcccgagggcgagattgagtccaactggaacgaggttgttgacaacttcgacgac
atgggtctcaaggccgagcttctccgtggcatctactcgtacggtttcgagcgcccctcc
gccatccagcagcgcgccatcgtgccctgcaccaagggccgcgacgtgattgcccaggcc
cagtccggtaccggtaagacggccaccttctccgtctccgtgctgcagcgcatcgacacc
acccgccccgagtgccaggccctcatcctcgcccccacccgcgagcttgccacccagagc
ctggacgtgctcgagaacctcggccagtacatggacgtcaagaccatgggctgcatcggc
ggtacccgcgtgcaggacgacatggccaagctcgagcagggcgtgcaggtcatcgtcggt
acccccggtcgtgtcttccacatgatcaacagcggtgccctcgacgtgtccaacctgggc
gtgtttgtcctcgatgaggccgatgagatgctttcctttggcttcaccgaccagatctac
gacatcttccagacgctccccaaggacgtccaagtcatcctcatctccgccaccatgccc
gatgacgtgctcgaggtgaccaagcgcttcatgcgcgaccccatccgcatcctcgtcaag
aaggagcagctcaccctcgagggtatccgccagttctacgtcgacgtcggcaaggaggac
tggaagctcgagaccctgagcgacatctggaagaccatcaccatctcccaggccgtcatc
ttctgcaacacccgccgcaaggtcgactggctcacggagcagctgcgcgcccgcggtcac
caggtctcctgcacccacggtgacatgacccaggacgagcgtaacatgatcatgaaggag
ttccgcgccggctccacccgcgtcctcatcaccaccgatctcctggcgcgcggtatcgac
gtccagcaggtctccctcgtcatcaactttgacctccccagcaaccgcgagaactacttg
cacaggattggccgtagcggtcgtttcggccgtaagggtgttgccatcaactttgttgct
gaggacgatgtgcgccgcctcaaggagctcgaggagttctaccagacccagattgacgag
atgcccaagaacgtcgccgacttcctctga
DBGET
integrated database retrieval system
