Salpingoeca rosetta: PTSG_07964
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Entry
PTSG_07964 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
sre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_07964
03015 mRNA surveillance pathway
PTSG_07964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_07964
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PTSG_07964
mRNA cycle factors
P-body specific factors
PTSG_07964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
16072327
NCBI-ProteinID:
XP_004991767
UniProt:
F2UGU6
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MSGASLGEDVGAGAGATIEDERQDDAVVADAAEGSGDWVKPVSAARVKEWVQRRKERHEL
REKHKAAPKERPNRAFFKALDGTVKKTTAFVKKLKSAITEQQRSSVMADFEKLNLTKFLS
EVAGSLAEAGLTKNADLQTAVTLASAMHCRYAEFDEALLDALKNTLTLPEPDDKDAMASF
RFAFLLYSECVLLGIYDEAEGKQLAKQVAGVVQNDKAKHHVYLPLVIDVLGAIAEELVGI
TARAMRLGAAAQGVDTHTEPLFPVVQGKLVPFLDQYYETVSAALIKRKEVLNERLKLNHA
TFETKGELRAEQKEQEEKLQAAFDELNGHVRSLANIIDKDLPELPEFKPEDVLAEMSMSI
TNPYLHASEDEVAAGIWGDVETREFYESLIELERIMPAVLFKGAKQRRQAVRELEQQQQQ
QREAEEGTVKGADGDGADDDEDAEGKKEDNEEAEEAVMEDADAVARELAAMGLDPSADDD
DDDDDDGEENAEDVEAAADVGDDDEEDKEAEAAVSGYLTEGSLDARPDLTLSTIAEIIEQ
LPRSSTAASVDEIAKQFCYKNSKNARSQLIERLYFVSREEQDLLPYYSRLVATLQPVIPD
IADTLANRLCATFRFLRRKFPISHYESKLRNARYIGELTKFRVIDGMKTLHLLQLLLRTF
KNHEVDTACMLLETCGRFLYRSPGTHVRTHLLLEVMKKKAARLRLSEHHRTLIDNAVLYC
NPPAASAMKKKERPPLHEYIRKLLYTDLKPTPAAIKTVATRLRKLPWNDKPFLQYGVKCL
TRVWIVTFSSIPAFASLLALLKAHIPNVTAMVVDAVCEEIRLGMEINDPKLRQRRVATAR
YFAEMYMFGLVTDALVMKVLYSLITFGVNTPLDPPKQYFRARLVCEIINATAEYFSPRTN
RKLDSFLVFFQRYMLLKRQPLPIDIDFTVSEMLENTRPKLKPFATPEEAAAAVEHLRAQQ
LRKHAAARGVTVEALQRELGVEGARQLSLQDADDDDDDDDDDDDDDDDDDDDDDDEDGEG
GVRTKRTVAKESPEPEEQQEEEDAKKEEEGDIAKPAPEDEKFVQQFNRLVADAGRSTKKT
ATPLEIRVPMHLQSKTIARTADEEGEKVHFTLFTKKKTHTLALPADIEFTDTVLKRHAAE
QKAREEEKRRIIRLEHRAQKEDIDQAAMEEAAAEAQRQRRGRGPGRGGRGGQSSRGRGRQ
QRRP
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgcaagtcttggtgaggacgtgggtgctggtgctggcgccacgattgaggac
gaacgccaagacgatgcggtggtggcagacgccgcggaggggagcggcgattgggtgaag
cctgtgagtgcagcacgagtgaaggagtgggtgcagcgccgaaaggagcgccatgagctg
cgcgagaagcacaaggctgcgcccaaggaacggcccaaccgagcgttcttcaaggcgctg
gatggcacggtgaagaagacgacggcgtttgtgaagaagctcaagtccgccatcaccgag
caacagcggtcctccgtcatggctgactttgagaagctcaacctgaccaagttcctgagc
gaggtggcaggctcgctggcagaggctgggctcaccaagaacgcggatctgcagacagcc
gtcacccttgcgtccgccatgcactgccggtacgcggagtttgatgaggccttgctcgac
gccctcaagaacaccctcactctccctgagccagacgacaaggatgccatggcgtccttc
aggtttgccttcctcctgtacagtgagtgcgttctgctgggcatctacgatgaagccgag
gggaagcaactggccaagcaagttgctggcgtggtgcaaaacgacaaagcaaaacaccac
gtgtaccttccgctcgtcattgacgtgctgggggccatagcggaggagctggttggcatc
accgcacgtgcgatgcgtcttggcgctgccgcccaaggcgtcgacactcacacggagccc
ctcttccccgtcgtccagggcaagcttgttccgttcctggaccagtactacgagacggtg
tctgctgcgctgatcaagaggaaggaagtcctcaacgagcgcctcaagctcaaccacgcc
acattcgagacaaagggtgagctgcgggctgagcagaaggagcaggaggagaagctgcag
gctgcatttgacgagttaaacggccacgtgcgctctctcgccaatatcatcgacaaggac
ctgccggagctgcccgagttcaagccggaggatgtgctagcagagatgagcatgagcatc
accaacccgtacttgcacgcgagcgaggacgaagtggctgcgggcatctggggcgacgtt
gagacgcgggagttctacgagtcgctgattgagctggagcggatcatgccggcggtgctc
ttcaagggcgcaaagcagcggcggcaggccgtgcgcgagttggaacagcaacagcagcag
cagagggaggcggaggagggaacggtgaagggtgctgatggtgatggtgctgatgatgac
gaggacgcggaggggaagaaagaggacaacgaggaggccgaagaagctgtaatggaggac
gcagatgcggtggcgcgggagctggcagcaatggggctggacccatcggccgacgacgac
gacgatgatgatgatgatggagaggagaacgcagaggatgtggaggctgctgctgatgtt
ggagatgacgatgaggaggataaggaagcggaggcggcggtgtccgggtacttgacggag
ggatcgctggacgcgcggcccgacctgacactctccaccattgcagagatcattgagcag
ctgccaaggtcgtcgacggcagcgagtgtggacgagattgcaaagcagttttgttacaag
aacagcaagaacgctcgctcccagctcattgagcggctgtatttcgtgtcgcgggaggag
caggacctgctgccgtactactcgcgactcgtcgccaccctccagcccgtcatcccagac
atagcagacacactcgcgaaccggctgtgtgcgacctttcgcttccttcgccgcaagttc
cccatcagccattacgagagcaagttgcgcaatgcgcgatacattggcgagttgacgaag
ttccgcgtgattgacggaatgaagacgcttcatctgctgcagctgctgctgcggaccttc
aagaaccacgaggttgacacggcatgcatgctgctggagacgtgcgggcgctttctctac
cgcagtcccggcacacacgtccgcacccacttgctcctcgaggtgatgaagaagaaggca
gcgcgactgcggctgtcggagcaccaccgcaccctcattgacaacgccgtcctgtactgc
aacccgcccgcggccagcgcaatgaagaagaaggagcggccaccactgcacgaatacatc
cgcaaacttctttacacggacttgaagccgacgccagcagccatcaagacagtcgcaacg
cgcttgaggaaactgccgtggaacgacaaaccgttcttgcagtatggcgtcaagtgcctg
acacgcgtgtggattgtgacgttcagctccatccccgcgtttgcgagtctcctcgccctg
ctcaaggcacacatccccaacgttaccgccatggttgtggatgcggtgtgcgaggagatt
cgactcgggatggaaatcaacgacccgaaactgcggcagcggcgcgtggcaactgcgaga
tactttgcagagatgtacatgtttggactggtcaccgacgcgttggtgatgaaagtgctg
tattcgctcatcacctttggcgtcaacacacccctcgatccaccgaagcagtacttccgc
gctcgtctcgtgtgcgaaatcatcaacgcaacagcagaatatttctctccgcgcaccaac
aggaagctggacagcttcctcgtgttctttcagcggtacatgctgttgaagcggcagccg
ctgcccattgacattgacttcaccgtctcggagatgctggagaacacacggccgaagctg
aagccgtttgcaactccggaggaggcggcggcggctgtggagcacctgcgggcgcagcag
ctgcggaaacacgcggcggcacgcggggtgacggtggaggcgttacagcgggaacttggg
gtggagggggccaggcagctgtccctgcaggacgctgatgatgatgatgatgatgatgat
gatgatgacgacgacgacgacgacgacgatgatgatgatgatgatgaggatggcgaaggc
ggtgtgaggacgaagcgaactgttgctaaggaatcaccagagccagaggagcaacaagag
gaagaagatgcaaagaaggaagaggagggcgatattgcgaagccggcccccgaggacgag
aagtttgtgcagcagttcaatcggcttgtcgctgacgccggccgctcgacaaagaagact
gccaccccactcgagatccgggtgccaatgcacctgcagtcgaaaacgattgcgcgcaca
gcggacgaggagggtgagaaggtgcactttacgctcttcacaaagaagaagacgcacacg
ctcgcgctcccggccgacattgagtttacagacaccgttctcaagcgacatgcggctgag
cagaaggcgcgagaagaggagaagcggcgcatcattcgtctcgagcaccgcgcgcagaag
gaggacattgaccaggccgcaatggaagaggcagctgcagaggcccagcggcagcggcgt
ggtcgtggtcctggccgcggtggtcgcggtggacagtcgtcgcgcggtcgtggtcgccag
cagcgtcgcccataa
DBGET
integrated database retrieval system
