Salpingoeca rosetta: PTSG_08218
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Entry
PTSG_08218 CDS
T04136
Name
(RefSeq) BTAF1 protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_08218
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PTSG_08218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3535
Helicase_C
TOR1L1_N
HEAT_EF3_N
ResIII
TPR_Trm732_C
HEAT_ECM29
HEAT_2
HEAT_EZ
MMS19_C
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
16071803
NCBI-ProteinID:
XP_004991242
UniProt:
F2UIC1
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MGKTRLDRLLVLLDTGSTRAHREMAAKEIGALVRLHPHDLQQLMCRVHNFLRSKSFETRV
AAGMAFRSIADNVNQWEPKLADKDDAGAEEQAHVLEGFERMLSFETFDLEFILEHGPRLL
GSSGLEYLEDDELKHLSPRQRLIRQRENLTKQLRQSMGGSGDDVGGGGGGVKVEDLVSEE
DLMAQPTKRAKVEPKDAAASQRVADSLRGLSARQINAMKRKKKQQKKAPKQSVYTGRDAS
ASSASSSSKSSKAMLTEQADKDKVVVETKIDADAVFANADEWPFQARCEEMCNDLFDPDW
GIRHGAAVGLRELISRHGATAGIIQHSDTAATQSRHNSRWLEDMAIRLICVLALDRFGDF
SSTQAVAPVREMAAQALGAVVKHMSAASVRRVLMLLLRLEQQHDWEVRHGGLLGVKYFAA
VRDDLVVSLLPDLLPVMLQGLQERDVDDVRAAAADTMIPMADHVVAHAPDTIKTIVTLLW
DALPELDDLSASAGSILKLLARLLNHLTAQNPESISHTHTGGVALEDLMNRLWAFFRHPR
TAIRTTVLHATREIVEAAARASVQSFFEVVLPHALVHTFQNLLLEDDGDVLEASKGVWMA
CLTHATPAQVAKALPNTQLLNFFRLLMTAQNTPITKAYLVRAGHGGGGGGGGVIVTSADG
SSVVSDGGPENIYLAGDQPLSHDEYVLMRARYSAAAALGQLTAKWTCTGEMPKTLANLTF
QMLQADARKKGTAPSSVRRLLGGVIVTSWATHARTTFADSDKTAIPDAIPDTMLTVLKED
SLYLEMTKLISRVQRACLELIDLYSRCGVPFEEVSKIDTATEFSFDRAMAFQEQTLPVWR
TLLPTPDAGIDQRRAREAELSELLSAITAEFTISTMRVRSSLAAGVIATGRLPDKITALV
KPLLESLSKEELPFLQQQSAAALARLIRLSIHNSPAACSKICGRVIKWLFADRTYCPTAA
HDSRVVAAEGVLTLMHMEDEEQRVQAALARKKKSRRAEVEDVDEIAAAAIGADDDSDDSS
AQEQQRATIQRMGAELALSATIYAFGADTLVQLPFLLESPRATLASVLAPRRAPEGTAAP
VPEDLSAPSTEEATAVTEALVTLQAILPRLPETLKEEVLSFLPDILTATRYPSVGVRFAA
AHTLAAMAAVEHLRVRVLVAVIDTVLPFLGDTKHVLRRQGAAEVCHVLTHTLDLDIIPFL
IILVIPIMGRMSDFDASVRKLVANTFGTLVRLMPLESGRPDPADMPAALVAMKAKQRSFL
EQLMDISKLERYALPVRIRATLRSYQQTGLDWMMFLNKYQLHGILCDDMGLGKTLQSICV
MAADHHERAEKFAQTKQADCQHLPSLVVCPSILTTHWRTEIHKFCDSLRPIVYAGPRASR
TRMRDTLADHDVVIMSYEMLRNDIEFLQTLHVNYCILDEGHIIRNAKSKIAQAAKAIQSN
HRLILSGTPIQNNALELWSLFDFLMPGFLGTAQQFKAQYSKPILAARDAKASKSDQERGA
LALEALHRQVLPFLLRRVKEDVLDDLPPKIIQDYLCDLSGVQRRMYESFGQTSQAQAAKD
VVRAGHDSGDRKGGKHIFQALNFLKRVCSHPLMVKADDVDAKVRAHIAQHGINLHDVHHA
TKLAALHQLLSDCSIGVSADATAAAASSHRALIFATHKQLLSLVARDLFDRHMPALTYRR
LDGDTPTHMRAEVVAEFNDDPTVDVLLLTTSVGGLGLNLTGADTVIFLEHDWNPMKDLQA
MDRAHRIGQGRTVNVYRLITRNTLEEKIMNLQRFKLNMANTIVSKDNSSLASMGTDQVLD
LFTLSEKPQEGEGGAEGEDGTAAASGGGSSSSGLRAILEEAEKLDEDVDYSDYNVDAFMK
KMH
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacacggttggaccggctgctcgtgctgctggacacgggcagcacgcgtgcg
catcgcgagatggcggccaaggagattggcgcgctggtgcgcctgcacccgcacgacttg
cagcagctcatgtgcagggtgcacaacttcctgcgctccaagtcgtttgagacccgcgtc
gctgcgggcatggcgtttaggtccatcgccgacaacgtcaaccagtgggaaccaaagctg
gcggacaaagacgatgccggtgctgaggaacaggcacacgtactggaaggctttgagcgc
atgctgtcgtttgagacctttgacctcgagtttatcctggagcacggcccccggctgctt
ggcagctcgggtctggagtaccttgaggatgacgagctcaagcacctcagcccgcgccag
cgactcatccgacagcgcgagaacctgacaaagcagctgcggcagtccatgggcggcagc
ggtgacgacgtcggcggcggtggtggcggcgttaaggtcgaggacctcgtcagcgaggag
gatctgatggcgcaaccgacgaagcgggcaaaggtggagccaaaggatgcggcggcgtca
cagcgcgtggcagactcccttcgcgggctcagcgcccggcaaatcaacgccatgaagcgg
aagaagaagcagcagaagaaggcgcccaagcaatcggtgtacacgggcagggacgcgtca
gcatcatcggcttcgtcctcgtccaagagcagcaaggccatgctcacggagcaggcagac
aaggacaaggtggtcgttgagaccaagattgacgctgacgctgtgtttgcaaacgcggac
gaatggcccttccaggccagatgcgaggagatgtgcaacgacctgtttgatcctgactgg
ggcatccgccacggcgccgctgttggcctgcgcgagctcatcagcagacacggcgcaacc
gccggcatcatccagcactcggacactgcggcgacgcaatcgcggcacaattcgcgctgg
ctggaggacatggccatccgcctcatctgcgtcctcgctctcgacagattcggagacttc
agctcaacacaggctgtcgcgccggtgcgggagatggcagcgcaggcgctgggcgctgtt
gttaaacacatgagcgcggcctctgtgcggcgtgtgctgatgctgctgttgcggctggag
cagcagcatgactgggaggtgcgacacggcggcctcctgggcgtaaagtactttgctgcg
gtgcgggatgatctggtcgtgtcgctgctgccagaccttctccccgtcatgctccaaggg
ctgcaggagcgagatgtggacgatgtccgcgcagccgccgccgacaccatgattcccatg
gcagaccacgtggtcgcacatgcccccgacacgatcaagacgattgtgacgctgctgtgg
gacgcgctgcctgagctggacgatttgtccgcttcggccggtagcatcttgaaactcctc
gcccgcctcctcaaccacctcacagcgcagaacccagaatccatctcgcacacgcacacg
ggcggtgtcgcccttgaggacctcatgaatcgcctgtgggcgtttttccgccacccgcgc
accgccatccgcaccaccgtcctccacgcgacgcgtgagattgttgaagcggcggcgcgg
gcgagtgtgcagtcgttttttgaggttgttcttccacatgccctcgtccatacgtttcag
aatctgctgcttgaggatgacggtgacgtgcttgaagcgtccaagggcgtgtggatggcc
tgcctcacacacgcaacaccagcgcaggtggcaaaggcgctgcccaacacgcagctgctg
aacttcttccgcctgctcatgaccgcccagaacacccccatcaccaaggcgtacctcgtg
cgcgcaggccatggcggcggtggcggcggcggcggcgtgattgtgacgtctgcggatgga
tcgtcggttgtgtcggacggcgggcccgagaacatctacctcgcaggcgaccagcccttg
tcccacgacgagtacgtgttgatgcgtgcgcggtacagtgctgctgctgctcttggtcag
ctcacagccaagtggacgtgcacgggcgagatgccaaagaccctcgcaaacctcacgttc
cagatgctgcaggctgatgcgcgcaagaaaggcactgcgccatcctctgttcgccgctta
ctcgggggcgtcatcgtcacgtcctgggccacgcacgcccgcaccacatttgccgactca
gacaagacggccatcccagacgccattccagacaccatgctcacggtgttgaaggaggac
agcctgtacttagaaatgacaaaactcatttcgcgggtgcagcgcgcatgccttgagctc
attgacctctactccagatgcggtgttccgttcgaagaggtgtccaagattgacacggcg
actgagttcagttttgatcgggcgatggcgttccaagagcagacgcttcccgtctggcga
acactcctgccgacgcccgatgccgggattgaccagcggcgtgcgcgagaggcggagctg
tcggagctcctcagcgccatcacggcagagttcaccatctccactatgcgggtgcggtcg
agtttggcggcgggcgtgatagcgacgggccggctgccggacaaaatcaccgctctagtc
aagccgctccttgaatcgctctcaaaggaggagctgccgtttctgcagcagcagtctgca
gcggcactggcgcgcctgattcgcctctccatccacaactccccggccgcgtgcagcaaa
atctgtggcagagtcatcaaatggctgttcgcagacaggacgtactgtccaacagcggcg
cacgacagccgcgttgttgctgcagagggcgtgctcaccctcatgcacatggaggacgag
gagcaaagggtgcaggctgcgctcgccaggaagaagaaatcacggcgggctgaggtggag
gatgtggacgagattgccgctgcagcaattggtgccgacgacgacagcgatgacagcagc
gcacaggagcaacagcgcgccaccatccagcgcatgggcgctgagcttgctctgtctgcg
acaatctacgcgtttggtgcagacacgcttgtccagcttcccttcttgctggagtcgcca
cgtgcaacacttgcatctgtgcttgcaccgcgtcgcgcgccagaggggacggcggcgccg
gtgccggaggatttgtccgcgccttcaacagaggaggcaacggccgtcacagaggcgctc
gtcacactgcaagccatcctacccagactcccggagacgttgaaggaggaggtgctgtcc
ttcctgccggacattttaaccgctacccgatacccgagcgttggtgtccgctttgctgcc
gcacacacgcttgcggccatggctgctgtggagcacctgcgtgtgcgcgtgcttgtagct
gtaattgacacggtgctgccgttcctcggcgacaccaagcacgttcttcgccgccagggc
gctgcggaggtctgccacgtcctcacgcacacgctcgatctcgacatcatcccgttcctc
atcatcctcgtcatccccatcatgggccgcatgtccgattttgacgcgtctgtccgcaaa
ctggttgccaacacgtttgggacgcttgtgcggctgatgccgctcgagtccggccgcccc
gaccctgcggacatgcccgcggcgctggtggcgatgaaggcgaagcagcggtcgttcctg
gaacagctgatggacatctccaagctcgagcgatacgcgctgcccgtcaggatccgcgcc
accctgcgcagctaccagcagacgggtctcgactggatgatgttcctcaacaagtaccag
ctgcacgggatcctgtgtgacgacatgggcctgggcaagacgctgcagtctatctgtgtc
atggctgcagaccaccacgagcgcgcagagaaatttgcacagacaaagcaggcggactgc
cagcacctgccctcgcttgtggtgtgcccgtccatcctcaccacccactggcgcacggag
atccacaagttctgcgactcgctgcgtccaattgtgtacgcggggccgcgggcatcacgc
acgcgcatgcgggacacgctggccgaccatgacgtcgtcatcatgtcgtacgagatgttg
cgcaatgacattgagtttctgcagacgctgcacgtcaactactgcatcctggacgagggc
cacatcatccgcaacgccaagtcgaagattgcgcaggcggccaaggcgattcagtccaac
caccggctcatcctcagcggcacgcccatccagaacaacgcgctcgagctgtggtcgctg
tttgactttctcatgcccgggttcctgggcacggcgcagcagttcaaggcacagtactcc
aagcccatcctggctgcccgcgatgccaaggcttccaagtctgaccaggagcggggcgcg
ctggcgctggaggccctgcatcggcaggtgctgccgttcttgctgcgccgcgtgaaggag
gacgtgctggacgacctgccacccaagatcatccaggactacctgtgcgacctgagcggc
gtgcagcggcgcatgtacgagtcgtttgggcagacgtcgcaggcgcaggcggcaaaggat
gtggtgcgcgccggccacgacagcggcgaccgcaagggcgggaagcacatcttccaggcc
ctcaacttcctcaagcgcgtgtgcagccacccgctcatggtcaaggcagacgacgtggac
gcaaaggtgcgggcgcacattgcgcagcacggcatcaacctgcatgacgtgcaccacgcc
accaagctggcagcgctgcaccagctgctgagcgactgttccattggcgtgagtgccgat
gcgacggctgcggcggccagcagccaccgcgcgctcatctttgccacgcacaagcagctg
ctgtcgctggtggcgcgagacctgtttgaccggcacatgccagcactgacgtaccgacgg
ctggacggcgacacgcccacgcacatgcgggcggaggtggtggcggagttcaacgacgac
ccgacggtggacgtgctgctgctgacgacctcggtgggcgggctgggcctcaatctcacg
ggcgccgacacggtgatcttcctggagcacgactggaacccaatgaaggacctgcaggcc
atggaccgcgcacaccgcattgggcaggggcgcacggtgaacgtgtaccggctcatcacg
cgcaacacgctggaggagaagatcatgaacctgcagcggttcaagctgaacatggccaac
accattgtcagcaaggacaacagctcgctcgcgtccatgggcacagaccaggtgctggac
ctcttcacgctctcggagaaaccgcaggagggcgagggcggcgcggaaggcgaggacggc
actgctgctgccagtggtggtggatcgtcgtcgtctgggctgcgcgccatcttggaagag
gcggagaagctggacgaggacgtggattacagcgactacaacgtggacgcatttatgaag
aagatgcactga
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integrated database retrieval system
