Salpingoeca rosetta: PTSG_08288
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Entry
PTSG_08288 CDS
T04136
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sre
Salpingoeca rosetta
Pathway
sre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PTSG_08288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sre04121
]
PTSG_08288
Enzymes [BR:
sre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
PTSG_08288
Ubiquitin system [BR:
sre04121
]
Ubiquitin ligases (E3)
HECT type E3
PTSG_08288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Peptidase_C25_C
MNHE
SOG2
Motif
Other DBs
NCBI-GeneID:
16071097
NCBI-ProteinID:
XP_004990540
UniProt:
F2UJ97
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MFTIPTTTIVIIDNGLGNKKNCACRQHLARKQKAAAYRERVDAALSRDEGALPPLQLYEV
VRMLLRVFDPAHDRDRFHTTAKIILRGVFAAGSDSANALNSYFSLILNKAVLQGWIAQVK
ALMRVASDVLVNLRDRRDDHALAHTSATLLLTCLDHERWKLPMDPAKAAVFRVIAGSFLT
TLDKPHVFAALKGYLDMCLAAPKSRCQPPTMAVIVALLNRLLSSTKDKDATLNAFCLSMM
QVPTVMAEIKLSTFTAKEDVLQYAIHHTQALVGALSDDGNAALFFLGNTCSLFDAQTTIK
HTDVQDLMSACVECCLNFTRKHQTRSAKSTKSSSTSSEHPLLGWYRGHTARGHLDAMPRV
LGQLRSLWSPLAVRTRFEDVWTETERLRGHNPKDGGLQTLGKLTHQQPPSSSSSPSSSSA
SSSSSAKPSLASSATSPRPTAANATTTASAPTPASSSSSLSSSWWAPSALRLRQIFQMTS
SSHRFVDKAASERVARACAFYQSLYTTIKVANQEVLGAIAFNLDLVPRLWTFMHHIGPKG
NMAVFMAVAAAAASGGLERDPLVACLEVACDATRILLTVVDDGEMFGAASATGGTGAGTT
GTGSGPLSAEHLILISAFLNRFMYSVIWDHGLSLSTMAKHSDRHHHARATTLLRSCTRLI
RLIRDLDDRQQFAPQNHWLLKQARPRTITAQYIKEATAAGGGGGGGSGGGDAAGDRAHTL
LRFLPHLVPFRERVKLLRQLLDHHRQRYLSALPQFRTDPMAKIRRTAVLTDGFREIRQLG
PDALRDNVRVVFINEQGLPEAGIDERGLFKEFLEQTLKAGFDPEFGLFTATPEGNNTLYP
SPTSSVHENHLQLFEYLGRMVGKMIYDGMVVELPLAPFFCNSILGISNTLRDLPALDPDL
ARNLQFVKTYEGDVSDLGLCFAVDDEVFGHHVTVPLRPGGSAIDVTNDNRILYVHLLADY
RLNKQLDKQNQAFARGLTHMVPRHWLRLFTAPELQRLISGDNAPLDINDLKRNAQYIGGY
TASHRMIKWLWEVVGRDFSREEQQMFLRFVTSSSKAPVLGFATLQPPFTVRCMNEGDREE
VVTVGGVLANFFSRGTDTARLPSASTCFNLLKLPTYKSKKALREKLRYAISQGAGFEMA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaatccccaccaccaccatcgtcatcatagacaacgggctcgggaacaagaag
aactgtgcttgcaggcagcatttggcaagaaagcaaaaggcagcagcgtaccgcgagcgc
gttgatgctgcgctgagcagagatgagggtgcactaccgccgctccagctgtatgaggtg
gtgcgcatgctgctgcgcgtgtttgatcccgcccacgaccgcgaccgcttccacactaca
gccaagattatcctgcgaggcgtgtttgctgccggcagtgacagtgccaatgccctcaac
tcgtacttctctctcatcctcaacaaagctgtgctccaaggctggatcgcgcaggtgaag
gcgttgatgcgagtggcgagcgacgtgctggtgaaccttcgtgaccgaagagacgaccac
gcccttgcccacaccagcgccaccctcctcctcacatgcctcgaccacgagcgatggaag
ctgcctatggaccccgccaaggcggccgtgttccgagtcattgccggctctttcctgacc
acgctcgacaagccacacgtctttgccgccctcaaggggtatctggacatgtgcttggct
gcgccaaagtcgcggtgtcagccgccaacaatggccgtcattgttgctctcctcaacagg
ctcctctcctccaccaaggacaaagacgccaccctcaacgcattctgcctatccatgatg
caagtgcccacggtcatggccgaaatcaaactctccaccttcactgcaaaggaagacgtc
ctccaatacgccatccatcacacacaggcgcttgtgggcgcactctctgatgacggcaat
gcagccctgttctttctcggaaacacatgctcgctcttcgacgcacagaccacaatcaag
cacacagatgtgcaggacttgatgtcggcgtgtgtggagtgctgtctcaacttcactcgg
aaacaccaaaccaggtctgccaaatccacgaaatcctcctccacctcctccgagcaccct
ctgctcgggtggtaccgtggccacaccgctcgcggacacctcgacgcaatgccgcgcgtg
ctgggccagctgcgctcgctctggtccccgctcgctgtgcgcacgcgatttgaggacgtg
tggacggagacggagcggctgcgggggcacaacccgaaggacggtgggctgcagaccctc
ggcaagttaacacaccagcagccaccatcgtcatcatcatcaccatcatcatcgtcagcg
tcgtcatcgtcgtcggcaaagccctcgttggcctcatccgcaacatccccaagaccaaca
gcagccaacgctacaaccaccgcatctgcaccaacgccagcatcatcctcatcctcgtta
tcctcatcgtggtgggcgccatctgcgttgcgactgcgccaaatcttccaaatgacatcg
tcgtcacaccggtttgtggataaggcggcgagtgagcgcgtggcgcgggcgtgtgcgttc
taccagtccctgtacacgaccatcaaagtggcaaaccaggaggtgctgggcgccatcgcc
ttcaaccttgaccttgtgccgcgcctgtggaccttcatgcaccacattgggcccaaggga
aacatggccgtgttcatggcggttgctgctgccgccgcttccggtgggctggagcgtgac
ccactcgtcgcctgtctggaggtggcgtgcgacgccacacgcatcctgctcaccgttgtt
gacgatggcgagatgtttggcgcagcatccgcaacaggaggaacaggcgcaggaacaaca
ggaacgggcagcggtcctctctcggcggagcacctcatcctcatctcggcgttcctgaac
agattcatgtactctgtcatatgggaccatggcctctccctcagcaccatggccaaacac
agcgaccgccaccaccacgcgcgcgccacgacgctcctgcgcagctgtacacgcctcatc
cgcctcattcgcgacttggacgaccggcagcagtttgcgccgcagaaccactggctgctc
aagcaggcgcgcccacgcaccatcactgcacagtacatcaaggaggccactgctgctggt
ggtggtggtggtggtggcagtggtggtggtgatgcggctggtgatcgtgcccacacgctg
ctgcggttccttccacacctggtgccctttcgcgagcgcgtgaagctgctgcgtcaactg
ctggaccaccaccgccaacggtacctctcggcactgccccagttccgcacggacccgatg
gccaagatcaggcgcaccgccgtgctcacagacgggttccgcgagattcggcagttggga
ccggacgccctccgcgacaatgtgcgtgttgtgtttatcaacgagcagggcctccccgag
gccggcattgacgagaggggattgttcaaggagtttctggagcagacgctcaaggcaggg
tttgatccagagtttgggctgttcacggcaacgccagagggcaacaacacgctgtatccc
tcgcccacgagcagcgtgcacgagaaccacctgcagctgtttgagtaccttggtcgcatg
gtgggcaagatgatctacgacgggatggtggtggagctgccgctcgccccgttcttctgc
aacagcatattgggcatcagcaacacgctgcgtgacctccctgccctcgatccagacctg
gcccgcaacctgcagtttgtcaagacgtacgagggcgacgtgagcgacctcgggctgtgt
tttgctgttgacgatgaagtgtttgggcaccacgtgaccgtcccgctgcggcccggcggc
agcgccatcgacgtcaccaacgacaatcgcatcctgtacgtgcacttgctcgccgactac
cgcctcaacaagcagctcgacaagcagaaccaggcgtttgcgcgcggcctcacgcacatg
gtgccgcggcactggctgcggctgttcacggcgcctgagctgcagcgtctcatctctggg
gacaacgcccccctggacatcaacgacctgaagcggaacgcgcagtacattggcggctac
acggcgagccaccgcatgatcaagtggctgtgggaggtggtgggccgggacttttctcgc
gaggagcagcagatgtttcttcgcttcgtcaccagcagctccaaggcgcctgtgctcggg
tttgccacgctgcagccgccattcaccgtgcgctgcatgaacgagggcgacagggaggag
gtggtcaccgttgggggcgttctcgccaacttcttttcccgcggcacagacacggcgcgc
cttccgtctgcatccacctgcttcaacctcctcaagctgcccacgtacaagtcaaagaaa
gccctgcgagagaagctgcgttatgcaatctcccaaggggcggggttcgaaatggcatga
DBGET
integrated database retrieval system
