KEGG   Salpingoeca rosetta: PTSG_08750
Entry
PTSG_08750        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sre  Salpingoeca rosetta
Pathway
sre03082  ATP-dependent chromatin remodeling
sre03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PTSG_08750
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PTSG_08750
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sre01009]
    PTSG_08750
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_08750
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_08750
Protein phosphatases and associated proteins [BR:sre01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     PTSG_08750
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     PTSG_08750
    SWI/SNF complex
     PTSG_08750
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    PTSG_08750
   PBAF complex
    PTSG_08750
   SWI/SNF complex
    PTSG_08750
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 16070688
NCBI-ProteinID: XP_004990134
UniProt: F2UKK9
LinkDB
Position
Unknown
AA seq 422 aa
MDDDAPRSFQLCEGGPRYMVAVEVARYFHQSPEQLFELYPSLYRRQATTAERGTLKRWNI
SHAPIVTLLLAEEVECILEKDDRRLHLQPLPAVAKKPSTFKDEKVLLTRSSHAPPIPKQP
TQPLKPARPRNLFAPYYASPCGLASTSDEEPEHLASITLNLDLNGHKLRDQFLWNTQDKS
ISVYKFAQQLCQDLEVPTLFTHQVAAAIQSQIDAHHALKEYTPETDNIIIKLEVQVGTTQ
LVDQFEWDISNPLNSPEHFAETLTRDLGLGPTYTNSIAVAIREKVLQAKQALLQSQVPEL
APPVADAEEVFRVADADEWGPALYTMSRRELHKKQTDEDRESRRRRRGRPEDRQSKRSKR
AQEQAKSDDAAFEVESLQALPSYTPRVKAYLVQRGFGDIEKKEWIKAALARQPPSKKAFS
NA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggatgacgatgctccacgctcgttccagctgtgcgagggtgggccgcggtacatggtg
gccgtggaagtggcgcggtatttccaccagtccccagagcagctgtttgagctgtacccg
tccttgtaccgacgacaggctactactgcggagcgggggactctcaagcgctggaacatc
tcgcacgcgcccatcgtgaccctgctcctggcagaggaggtggagtgcatcctcgagaag
gacgaccggcgcctgcacttgcagccgctgccagccgtggccaagaagccatccaccttc
aaagacgagaaagtgcttctcacccgcagctcgcacgcacctcccatcccgaagcagcca
acgcaaccactcaagcctgcccgtccacgcaacctctttgcgccctactacgcgtctccg
tgtggacttgcgagcacctccgacgaggaacccgagcaccttgcctccatcaccctcaac
ctcgacctgaatggccacaagctcagagatcagttcctgtggaacacccaggacaaatcc
atcagcgtgtacaagtttgcccagcagctgtgccaggatctggaggtgcccacgctgttt
acacatcaggtggcggcggcaatacagtcgcagattgacgctcaccatgctctcaaggag
tacacgccagagaccgacaacatcatcattaaactggaggtgcaagttggcacgacgcag
cttgtggaccagtttgagtgggacatctcaaacccgctcaactcccccgagcactttgcc
gagacgctgacacgcgacctgggtcttggccctacgtataccaacagcatcgccgtggcc
attcgcgagaaagtgctgcaggcaaagcaggcgctgctgcagtcacaggtgcccgagctc
gcaccgcccgtcgccgatgcggaggaggtgttccgtgtcgccgacgctgacgagtggggc
cctgccctgtacaccatgtccaggcgggagctgcacaagaagcagacagacgaggatcgg
gagagcagacgacgccgccgtggacggccagaggaccgccagtcgaagcggagcaagcgg
gcgcaggagcaggccaagtccgacgatgcggcgtttgaggtggagtcactgcaggcgctg
ccgtcgtacacgccgcgcgtcaaggcatacctcgtgcagagggggtttggcgacattgag
aagaaggaatggatcaaggctgcactcgctcgccagccgccaagcaagaaggcgttctca
aacgcatag

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