Salpingoeca rosetta: PTSG_08910
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Entry
PTSG_08910 CDS
T04136
Name
(RefSeq) elongation factor-1alpha
KO
K14416
elongation factor 1 alpha-like protein
Organism
sre
Salpingoeca rosetta
Pathway
sre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PTSG_08910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_08910
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PTSG_08910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
16070849
NCBI-ProteinID:
XP_004990296
UniProt:
F2UL21
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MTTTTTTTAIAPAPLGGGSHINLSAASTRGNGGKKKNKKNKKKSKGGLKVKDKTSTGQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHTSSKQNGNGIHSHEQQPAARGAVEA
GDAGDKQPPKLSLTISSSPSTTTTTTTTTTTTTPTAVATTSTASSSSTAATGSTTADGAR
EEPTQGATKPKKAKTSKDKAEVSNVKRKWKKPKTIARTKLSDVVPPPHLSSTINLVVIGH
VDAGKSTLVGHLLTQMGVIDPKLLHKCKQESARIGKGSFAFAWLLDEESEERSRGVTVDV
GQKSFASEHRRFTLLDAPGHRDFIPNMITGASHADAAVLVVDASPGEFESGFDADGQTRE
HILLARSLGISQLVVAINKMDMVSWSEDRYQEIVARLQPFLKQRGFAIAADAIVPVSGLE
GLNLKERHALDWYSGPTLLQALDALEVRPREWKSPLRATIADVYKVAGFSSVHVAARIVT
GCVHEGDTVVALPNFEYGTVKQVLVAEERVKAAYAGDACTIVLAGIDEALIRAGNLVCHP
DEEPPLATRIRCKIVVFDAPRPLLKGSQFTLHHQQEDVPARIKSIVSQTNRRTGEIEKHK
PRALPRNSVGVVVIALDTALSLETYEQVKDLGRVTLRQEGRTVAAGIIDAIVRAERVE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacaacgacaacaacggcaatagcaccagcaccactggggggcggcagccat
atcaacctttccgcggcgagtacacggggaaatggagggaaaaagaagaacaagaagaac
aagaagaagagcaagggaggcctcaaggtgaaggacaagaccagcacaggacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacacacgtcgtcgaagcag
aatggcaatggaatccacagtcatgagcaacagcctgcagcgcgcggcgccgttgaagct
ggcgatgctggtgacaaacaaccgccaaaactgtccctgaccatctcaagttcgccctca
accacaacaacaacaacaacaacaaccaccaccaccactccaactgctgtcgccaccact
tcgactgccagcagcagcagcactgcagctactggttccaccactgctgatggtgcacgc
gaggagccaacgcagggagcaacaaagccgaagaaagcaaagacatccaaggacaaggca
gaggtgtcgaatgtcaagcggaagtggaagaaaccaaagaccatcgcacgcacgaaattg
agcgacgtagtgccaccgccgcatctgagcagcaccatcaatctcgtcgtcattggtcat
gttgatgccgggaagagcacactcgttgggcacttgttgacgcagatgggtgtcattgac
ccaaaactgctgcacaaatgcaagcaggagtcggcgcgaatcggcaagggctccttcgcc
tttgcctggctcctcgacgaggagtctgaggagcggtcgcgcggcgtgacggttgacgtt
gggcagaagtcgtttgccagcgagcaccgccgcttcaccctcctcgatgcaccgggccat
cgcgacttcatcccaaacatgatcacgggcgcctcccacgccgatgctgctgtgctggtg
gtggatgcgtctcctggcgaatttgagtctggatttgacgcggacgggcagacgcgcgag
cacattctcctcgcccgctcgctcggcatctcgcagctcgttgtcgcaatcaacaagatg
gacatggtatcctggagcgaagaccggtaccaggagattgttgcccgtctgcagccgttc
ctcaaacagcgcgggtttgccattgcggctgacgcgattgtccccgtgagcggactggaa
ggcctcaacctgaaggagcgccacgccctcgactggtacagcggtccaaccctcctccaa
gcactcgatgcgcttgaggtgcggccgcgggagtggaagagcccccttcgcgccacaatt
gcggatgtgtacaaggtcgcgggtttctcctccgtccacgtggcagcacgcatcgtcacg
ggatgcgttcacgagggcgacacggtcgtcgcactgccaaacttcgaatacggcaccgtc
aaacaggtgctggttgcggaggagcgcgtcaaggctgcgtatgccggcgatgcgtgcacg
atcgtgcttgcaggcatcgacgaagcgctcatcagggccggtaatctggtgtgccatcca
gacgaggagccaccactggcgacgcgaatcaggtgcaagattgttgtgtttgacgccccg
cgcccgttgctaaaagggtcacagttcactcttcaccaccagcaggaggacgtgcctgca
cgcatcaagtccatcgtctcccagaccaatcggcgcacaggagagattgagaagcacaaa
ccgcgggcgctgccacgcaacagcgtcggtgttgtcgtcattgcactcgacactgcgctg
tcgctcgagacgtacgagcaagtgaaggaccttgggcgcgtgacgctgcggcaggagggg
cggacggtggctgccggcatcattgacgcgatcgtcagggccgaacgggtcgagtga
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