KEGG   Salpingoeca rosetta: PTSG_08923
Entry
PTSG_08923        CDS       T04136                                 
Name
(RefSeq) splicing factor U2af 38 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sre  Salpingoeca rosetta
Pathway
sre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTSG_08923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_08923
Spliceosome [BR:sre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    PTSG_08923
 Complex B
    PTSG_08923
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2 Nup35_RRM_2
Other DBs
NCBI-GeneID: 16070863
NCBI-ProteinID: XP_004990308
UniProt: F2UL33
LinkDB
Position
Unknown
AA seq 278 aa
MADYLASIFGTEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTVLLQNLYQNPANMPA
LSDGRPGCAMTEEELQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKN
EEDAEKAVEDLNNRWYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFCNFMHLKPLSK
SMRDVLFGDRRREVSPGNMQFDDGPRRGGRGRFDRRDRFDRRDRGGRHHRDRYERRDRYE
RYDRYERRDRSRDRDRDRDRDFGGDRRERDRDYDDRRD
NT seq 837 nt   +upstreamnt  +downstreamnt
atggctgactacttggcgtccatcttcggcacggagaaggacaaggtcaactgctccttc
tactacaagattggtgcctgccgtcatggcgatcgttgctcccgcttgcacaacaagccc
accttctcacagacggtgctgttgcagaacctgtaccagaaccctgccaacatgcctgcg
ctctcggatgggcggccgggctgcgccatgacggaggaggagctgcaggagaactttgac
aacttctttgccgatctcttctgggagcttgaggagaagtatggccccatcgtcgacatg
aacgtgtgcgataacctcggcgaccacctcgtgggcaacgtctacatcatgttcaagaac
gaagaagacgccgaaaaggccgtcgaggacctcaacaaccgctggtacaacggcaacccg
attgttgctgagctgtcacctgtcaccgacttcaaggaggcgtgctgtcgccagtatgaa
cttggcgaatgcacacgcggcggtttctgcaacttcatgcacctcaagcccctttccaag
tcaatgcgggacgttctgtttggcgaccgccgccgggaggtcagcccgggcaacatgcag
tttgatgacggcccgcgccgtggagggcgtggccgctttgaccgccgtgatcgctttgac
cgccgcgaccggggcggccgccaccaccgcgacagatacgagcgccgcgacagatacgag
cgctacgacagatacgagcgcagggaccgcagcagggaccgtgatcgtgaccgtgatcgt
gactttggtggcgatcgcagggagcgcgacagggactacgacgaccgccgcgactga

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