Salpingoeca rosetta: PTSG_09151
Help
Entry
PTSG_09151 CDS
T04136
Name
(RefSeq) chromatin assembly factor 1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_09151
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PTSG_09151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
PEP5_VPS11_N
eIF2A
Motif
Other DBs
NCBI-GeneID:
16069950
NCBI-ProteinID:
XP_004989405
UniProt:
F2UMV7
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MRAKFHEISWHFSRADGVPKPVFAVDFDPTIGNSEHSSSSSEEGNSGSGSEGNSSNTAQR
RAADTARRWPLGRDCYRLATAGGDNTVKVWKMDCTDAKDPKVSFLSELKHQASVNCVRFS
PSGALLAAADDSGTIILWRRPAPTPAPALHPHAVGPMATVLAAPASTAAASSTAASSSSS
SGATGGAAEKTGNLEADEVENVEEWKYERRITVHRDDIYDLAWSKDGRLLLSGSIDNTAC
LFNVATGKLVQQFRDHKQFVQGVAWCPRGDQLLTMSSDRTCRVYGLSRRKKARNMFTPTC
TLAHMDTDQARHAKQSGGSSSSSGGNSGDAAGDDNKDDKQRPKRERMFVDETKTLYFRRP
SYSPDGSLFICPAGTYRDTHGQPRFASYVFRSSMPAQPVLRLPARMTTISVRFSPQFYAA
RTRDGQPLTGIFAGLRHRMVYAVVTKRAVLVYDTHQAAPLAVVAGTHKAALTDAAWSRDG
RVLVVSSEDGYCSSVHFGSGELGTPIASPPLAGGDGDTKADKGKDKQAKAEVEATKAVEG
AGKGGGVDSAGADQARKDKQSGATDNAVAASVASSSSSSSSSSSSSLQQQQQGGGAVTVL
KPRKKQKARITPTAAKQPDTSTSNVTSNVIVNASATDRRSSGGGDSSSTKDDSTTSSSSS
SSGSGGVSGGRGVGAEKRQGSADDKTEEPGQTGASPSAQQKKQRRRIIPLGLATPPHSKP
SQPSSSSSTAAGATTGIAAGSASTTTASGSSSQDGFATRHPPIITNTASQPADIGEAPMT
RAVCFISHEHACVCCCPGDA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccaagtttcatgagatcagctggcactttagccgagcggatggggtgccaaag
ccagtgtttgcagtggactttgatccaaccatcggcaacagtgaacacagcagcagcagc
agcgaggagggcaacagtggcagcggcagtgagggcaacagcagcaacacggctcagaga
agggcagccgacaccgcaaggagatggcccctgggcagggactgctatcggctggcaaca
gccggcggcgacaacaccgtgaaggtgtggaagatggactgcactgacgccaaggaccca
aaggtgtcctttctgtcggagctcaagcaccaggcgtcagtcaactgcgtgcggttctcg
ccctctggggcgctactggctgcggcagacgattctggcaccatcatcttgtggcgccgg
ccagcgcccacgcccgcgcccgccctgcacccgcacgccgtcggtccgatggcaacagtg
ttggcagcacccgcgtcgacagcagcagcatcctcgacggcggcatcgtcgtcgtcatcg
tcgggcgccactggcggcgcggcggagaagacggggaacctggaggctgacgaggtggag
aatgtggaagagtggaagtacgagcgccgcatcacggtgcaccgcgatgacatctacgac
ttggcgtggtcgaaggacggccgcctcctgctgtcgggctccatcgacaacacggcgtgc
ctcttcaacgtggccacgggcaagctggtgcagcagtttcgcgaccacaagcagtttgtg
cagggggtggcgtggtgcccgcgcggcgaccagctgctgacgatgagctccgaccgcacg
tgccgcgtgtatgggctgtcgcggcgcaagaaggcgcgaaacatgttcacgccaacctgc
acactcgcacacatggacacagaccaggcacggcacgcaaaacagagcggcggcagcagc
agcagcagtggaggcaacagtggtgatgctgctggtgacgacaacaaggatgacaagcag
cggcccaaacgggagcggatgtttgttgacgagacgaagacgctgtactttcgccggccg
tcgtattcgcccgatggctcgctcttcatctgccccgccggcacatacagggacacacac
ggtcagcctcggtttgcttcgtacgtcttccgcagcagcatgccagcccagcccgtgctg
cggttgcctgcacgcatgacaacgatctccgtccgcttttcgccgcagttttacgccgcg
cgcacacgcgatgggcagccgctcacaggcatctttgcaggcctgcggcaccggatggtg
tatgctgtggtgacgaagcgtgctgtgctggtgtacgacacgcaccaggccgccccgctc
gccgtcgtcgcagggacacacaaggccgcgctcacagacgcagcgtggtcgcgtgacgga
cgggtgctggttgtgtcgtctgaggacgggtattgcagtagcgtgcactttggcagcggg
gagctcgggacacccattgcatccccgccgctcgctggtggtgacggggacaccaaggca
gacaaggggaaggacaagcaggcgaaggcggaggttgaggcgacgaaggcagtggagggt
gcaggcaagggtggtggcgttgacagtgctggtgctgaccaagcgaggaaggacaagcag
tctggtgcaacggacaacgcagtggcagcatcagtagcatcatcatcgtcatcgtcatcg
tcgtcgtcatcgtcgtcactgcaacagcagcaacagggtggtggtgctgtgacggtattg
aaaccgcgaaagaagcagaaggcgcgaatcacgccaacagcggcgaaacaacccgacact
tccacttccaatgtcacttccaatgtcattgtcaatgcaagcgccactgacaggcgcagt
agcggtggcggagacagcagcagtacgaaggatgacagcaccacaagcagcagcagcagc
agcagcggtagtggtggtgtgagtggtggacgtggtgttggtgcagagaagcgacaaggg
agtgcggacgacaagacggaggaaccgggacagacaggcgcgtcaccatcagcacagcag
aagaagcagcgccgtcgcatcatcccgctcgggctggcaacacccccacactccaaacca
tcacaaccatcgtcatcatcatcaacagcagcaggtgccaccaccggcattgccgccggc
agcgcgagtaccacgactgcctcgggctcgtcgtcgcaggacggatttgccactcgccac
ccgcccatcatcaccaacacggcgtcccagccagccgacattggtgaggcccccatgacg
cgcgctgtctgcttcatctcacacgaacacgcgtgtgtttgctgctgcccgggcgacgca
tga
DBGET
integrated database retrieval system