Salpingoeca rosetta: PTSG_09316
Help
Entry
PTSG_09316 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K21879
whirlin
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sre03037
]
PTSG_09316
Cilium and associated proteins [BR:
sre03037
]
Primary cilia and associated proteins
USH complex and associated proteins
PTSG_09316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
Motif
Other DBs
NCBI-GeneID:
16070124
NCBI-ProteinID:
XP_004989574
UniProt:
F2UMA2
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MQASPPTRSQHVAEFQEMAQHYLNDHEKVQLQHALTEFKHSKSVPRLVATLNIVLDTPQK
RDLLRPLRFLIPDDFALRSAFDKMAPYEHMAHPISKQELESLGVSRPLSIQRHQHESFGM
NIRGGYDMGTGVFVSSVDADSPSGRAGLRIGDEILSANGISFQGITHARAVEIIKTTTIL
RLVVRYTGHVPAKYVARSTFNWVDGKGQALATSLGAPMGGRSSPSLPTDEGERRVLLQKS
TGPLGFSIRGGSDFDLPVFISSVDRHGQAESAGLMPGHQILSINDEDVTAFRHEEVIDLI
RRSDDLLMVVKYRGRVPTHRIDVDDVKFVPAEEVEREQQEATKHKHRVAEPPVVGAASKM
AMEAAVVDVLGADVGQPVANAVRSYLHGRLPLKDMARYLLAQLSDPHHFRVLATIRPLLK
PFDVSVFNALVSTQELQAKQHLIAQHAKEEEEQKKAQRGDQAWPDYGDTGTLRIDISKSD
SSRRLGLVVQGGEPITHVDAHARGASAQKALQFGGIVIRDVRADGCARAAGVRAGMLLLR
VENHSTRGLRHEEAVAMVAQAWRHDASTALTLLVTETPKFSFDPWVPPSLPLTDREDNIL
ASTHL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtccccaccaacacggtcacagcatgtggctgagttccaggaaatggcccag
cactatctcaatgaccatgagaaggtccagttgcagcatgcgctgacagagtttaagcat
tcaaaatccgtgcctaggctcgtggccacgctcaatattgttctcgacacaccacagaag
cgcgacttgctccggccgctgcgcttcttgattccagatgactttgcgcttcgttcggcg
tttgacaagatggcaccttacgagcacatggcacaccccatctcaaagcaagaactggag
tcgcttggtgtgagccgcccgctcagcatccagcgccaccaacacgagagtttcggcatg
aacatccgtggtggatacgatatgggtacgggcgtgtttgtgtcgtcggtggatgcggat
tccccttccggtcgcgcgggtcttcgcattggtgatgaaatcctctctgcaaacggcatt
tcgttccagggcattacccatgcgcgcgcagtggagattatcaagaccacaacgatcctt
cgcctcgtcgtgcggtacacgggccacgtgccagcgaaatacgtggcgcgctcaacattc
aattgggtggacggaaagggtcaggcgctcgcgacgtccctgggcgccccgatgggtggt
cgatcctcgccatcgctgccgacggacgagggcgagcggcgcgttctgctgcagaaaagc
acaggaccgctgggattcagcatccgtggcggaagcgactttgacctgcccgtcttcatc
tcaagtgttgatcgccacggccaggcggagagcgctggcttgatgccggggcaccagatc
ctgagcatcaacgacgaggacgtgactgcgtttcggcacgaggaagtcattgatctgatt
cggcgatctgatgatctgttaatggtcgtcaagtatcgtggccgcgtcccaacacaccgc
atcgatgtggacgacgtcaagtttgtgccggcggaagaggtggagagggaacagcaggag
gcaacaaagcacaaacaccgcgtcgcagagccgcctgtcgtcggggccgcatccaagatg
gcaatggaagccgctgttgtcgacgtgctcggagcagacgttgggcagccggttgccaat
gcggtgcgctcgtatctgcatgggcgactgccgttgaaggacatggcgcgatatctcctt
gcacagctctcggacccgcaccacttccgcgtcctcgccaccattcgcccgctcctcaag
ccgtttgatgtttccgtgttcaacgcgttggtgtcgacacaagagctgcaggcaaagcag
cacctgattgcacagcatgcaaaggaggaggaggagcagaagaaggcgcagcgcggcgac
caagcgtggccggactacggagacacggggactctgcgcatcgacatcagcaagagcgac
agcagccgtcgtcttgggcttgttgtgcagggcggcgagccaatcacacatgtggacgca
cacgcgcgtggtgcatccgcgcagaaggcgttacagtttggcggaattgttatcagggac
gtcagggctgacgggtgtgcgcgtgcggccggtgtgcgtgcggggatgctgctgctgcgt
gtggagaatcacagcacgcgcgggcttcgacacgaggaggccgtggccatggtcgcccag
gcatggaggcatgacgccagcaccgccctcacactgctggtgacagagacgcccaagttc
tcgtttgacccctgggtaccgccctctcttcccctcacagaccgcgaagacaacattctt
gcttcgacccacctctga
DBGET
integrated database retrieval system