KEGG   Salpingoeca rosetta: PTSG_09316
Entry
PTSG_09316        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K21879  whirlin
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sre03037]
    PTSG_09316
Cilium and associated proteins [BR:sre03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   PTSG_09316
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 HHD_RTEL1 USH1C_N
Other DBs
NCBI-GeneID: 16070124
NCBI-ProteinID: XP_004989574
UniProt: F2UMA2
LinkDB
Position
Unknown
AA seq 605 aa
MQASPPTRSQHVAEFQEMAQHYLNDHEKVQLQHALTEFKHSKSVPRLVATLNIVLDTPQK
RDLLRPLRFLIPDDFALRSAFDKMAPYEHMAHPISKQELESLGVSRPLSIQRHQHESFGM
NIRGGYDMGTGVFVSSVDADSPSGRAGLRIGDEILSANGISFQGITHARAVEIIKTTTIL
RLVVRYTGHVPAKYVARSTFNWVDGKGQALATSLGAPMGGRSSPSLPTDEGERRVLLQKS
TGPLGFSIRGGSDFDLPVFISSVDRHGQAESAGLMPGHQILSINDEDVTAFRHEEVIDLI
RRSDDLLMVVKYRGRVPTHRIDVDDVKFVPAEEVEREQQEATKHKHRVAEPPVVGAASKM
AMEAAVVDVLGADVGQPVANAVRSYLHGRLPLKDMARYLLAQLSDPHHFRVLATIRPLLK
PFDVSVFNALVSTQELQAKQHLIAQHAKEEEEQKKAQRGDQAWPDYGDTGTLRIDISKSD
SSRRLGLVVQGGEPITHVDAHARGASAQKALQFGGIVIRDVRADGCARAAGVRAGMLLLR
VENHSTRGLRHEEAVAMVAQAWRHDASTALTLLVTETPKFSFDPWVPPSLPLTDREDNIL
ASTHL
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgcaagcgtccccaccaacacggtcacagcatgtggctgagttccaggaaatggcccag
cactatctcaatgaccatgagaaggtccagttgcagcatgcgctgacagagtttaagcat
tcaaaatccgtgcctaggctcgtggccacgctcaatattgttctcgacacaccacagaag
cgcgacttgctccggccgctgcgcttcttgattccagatgactttgcgcttcgttcggcg
tttgacaagatggcaccttacgagcacatggcacaccccatctcaaagcaagaactggag
tcgcttggtgtgagccgcccgctcagcatccagcgccaccaacacgagagtttcggcatg
aacatccgtggtggatacgatatgggtacgggcgtgtttgtgtcgtcggtggatgcggat
tccccttccggtcgcgcgggtcttcgcattggtgatgaaatcctctctgcaaacggcatt
tcgttccagggcattacccatgcgcgcgcagtggagattatcaagaccacaacgatcctt
cgcctcgtcgtgcggtacacgggccacgtgccagcgaaatacgtggcgcgctcaacattc
aattgggtggacggaaagggtcaggcgctcgcgacgtccctgggcgccccgatgggtggt
cgatcctcgccatcgctgccgacggacgagggcgagcggcgcgttctgctgcagaaaagc
acaggaccgctgggattcagcatccgtggcggaagcgactttgacctgcccgtcttcatc
tcaagtgttgatcgccacggccaggcggagagcgctggcttgatgccggggcaccagatc
ctgagcatcaacgacgaggacgtgactgcgtttcggcacgaggaagtcattgatctgatt
cggcgatctgatgatctgttaatggtcgtcaagtatcgtggccgcgtcccaacacaccgc
atcgatgtggacgacgtcaagtttgtgccggcggaagaggtggagagggaacagcaggag
gcaacaaagcacaaacaccgcgtcgcagagccgcctgtcgtcggggccgcatccaagatg
gcaatggaagccgctgttgtcgacgtgctcggagcagacgttgggcagccggttgccaat
gcggtgcgctcgtatctgcatgggcgactgccgttgaaggacatggcgcgatatctcctt
gcacagctctcggacccgcaccacttccgcgtcctcgccaccattcgcccgctcctcaag
ccgtttgatgtttccgtgttcaacgcgttggtgtcgacacaagagctgcaggcaaagcag
cacctgattgcacagcatgcaaaggaggaggaggagcagaagaaggcgcagcgcggcgac
caagcgtggccggactacggagacacggggactctgcgcatcgacatcagcaagagcgac
agcagccgtcgtcttgggcttgttgtgcagggcggcgagccaatcacacatgtggacgca
cacgcgcgtggtgcatccgcgcagaaggcgttacagtttggcggaattgttatcagggac
gtcagggctgacgggtgtgcgcgtgcggccggtgtgcgtgcggggatgctgctgctgcgt
gtggagaatcacagcacgcgcgggcttcgacacgaggaggccgtggccatggtcgcccag
gcatggaggcatgacgccagcaccgccctcacactgctggtgacagagacgcccaagttc
tcgtttgacccctgggtaccgccctctcttcccctcacagaccgcgaagacaacattctt
gcttcgacccacctctga

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