Salpingoeca rosetta: PTSG_09399
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Entry
PTSG_09399 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14571
ribosome biogenesis ATPase
Organism
sre
Salpingoeca rosetta
Pathway
sre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PTSG_09399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_09399
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PTSG_09399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_22
AAA_14
Vps4_C
TIP49
NPHP3_N
AAA_33
AAA_28
RNA_helicase
AAA_25
Mg_chelatase
nSTAND3
ABC_tran
NACHT
AAA_17
IstB_IS21
Parvo_NS1
ATPase
AAA_18
Rad17
AAA_7
AAA_3
ATPase_2
TsaE
nSTAND_NTPase5
AAA_24
DUF815
Motif
Other DBs
NCBI-GeneID:
16070207
NCBI-ProteinID:
XP_004989656
UniProt:
F2UMI4
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MPRRGGGGSSGGFARTLIPKMKQIQAERPGAPLTVDEMAMTLKSRFRWAFRLLQKDKQKA
KKAAAAAQQAGVEDAAVVVDADGEGDDDFDTSDLQPSKRSRLTSTGPSSPSADTPSTTDD
RARKKKSKSAARQLMDSISQLSDPNARKKKVFPVEQSSTTLEDLGGLDHTISVVRSTMDA
TFRGAYMFKHLGFEPPKGLLLHGPPGCGKTLLASAIAGEWEVPFIKVSAPELIGGTSGDS
EQFIRDLFEQAIAIAQRDKRGCIVFLDEIDTITSKRENAQREMERRIVAQLMTTMDNLSL
ENTGGSPVLVIGATTRPDALDPAIRRTGRFDTEVALSVPDIDARAHILAVICRNKRIDAG
VDFANLAKRTPGFVGADLMSLANQACLNAVLTALAAQDSGDSDGNGDGDGVVAAETKKGV
KEEAASNSVGGADAMVKAEMKEEASAARSDAGAGAGVGSTIDTNADTTADTAADTTADRA
ADTAGPKQEAAGDGDGDGQDLSVVIDESMDAEPTIETITLDDVTEDTAAQFMELQHLQYL
SVTTADFEAALKRVQPSATREGFATTPSVTWDDVGALGGPRRELEEAIKFPLQAPELCAS
VGIRKPPGVLLYGPPGCGKTLLAKALANSCNANFISIKGPELMNKFVGESERAVRQLFTR
AKTSSPCVVFFDELDALCPRRGDASSSRVSERIVNQLLVELDGFDSGEEKIFVIGATNRI
DIIDPAMLRPGRLEKLVYVDLPDQHARAEIFKTQARNISLAPDVDLTAVAADSRCQQYTG
ADSAALLREAGNAAIWRLLQENNQDFDKTAAMRPAISTADLEVAMRKVKPSVSKRDLARY
RRVADEFSLRESSASRQHKDADAE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtcgtggaggtggaggaagcagtggcgggttcgctcgcactctcatccccaag
atgaaacagattcaagccgagcgcccaggggcgcctctcaccgtggatgagatggcaatg
acgctcaaatcgagattcaggtgggcgttcaggctgctgcagaaggacaagcagaaggca
aagaaggctgccgctgccgcccagcaggcgggcgtcgaagacgctgctgtagtcgtggac
gccgatggcgagggagatgacgactttgacacatccgacctgcagcccagcaagcggtca
cgcctgacgtcgacgggcccgtcatcaccgagtgccgacacgccatccaccaccgacgat
cgcgcgcgaaagaaaaagtcgaaatcggccgcgcggcagcttatggacagcatcagccag
ctcagcgatccaaacgcccgcaaaaagaaagtgtttccggtggagcagtcctcgacaacg
ctggaagatcttggtggcctcgaccacaccatatccgttgtgcgatcaacaatggacgcg
acgttcaggggtgcgtacatgttcaagcatctcggctttgagcccccaaaggggctgctc
ctccacgggcccccaggctgcggcaagacgctgcttgcctccgccattgctggggaatgg
gaagtgccgtttatcaaggtgtctgcgcccgagttgattggcggcacttctggcgattcg
gagcagtttattcgcgacctctttgaacaggcgattgcgattgcgcaacgggacaagcgg
ggctgtattgtctttctcgatgaaatcgacaccatcacctcgaagcgagagaatgcgcag
cgagaaatggagcgaagaattgttgcgcaactgatgacgaccatggacaacctctccctt
gaaaacacgggcggcagccccgttctcgtcatcggcgcaaccacgcgaccagatgcactt
gatccggccattcgccgtacgggtcgcttcgacacagaggttgccctctcggtcccagat
attgacgcgcgcgcgcacatcctcgctgtcatctgccgaaacaaacgcatcgatgccggg
gtggactttgccaatcttgccaagcgcactcctgggtttgtgggcgcggatctgatgtcg
ctcgcgaaccaggcgtgtctcaacgctgtgctcactgcacttgcggcacaggatagcggt
gatagtgatggcaatggtgatggtgatggtgtggtggcggcggagacgaagaagggggtc
aaggaggaagcagccagcaatagcgttggtggcgctgatgcgatggtgaaagcggagatg
aaggaggaggcaagtgctgcgcgcagtgatgctggtgctggtgctggtgtgggctccacc
atagacacaaacgcagacacaacagcagacacagcggcagacacaacggcagacagagca
gcagacacagcaggacccaagcaggaagcagcgggtgatggtgacggtgatggccaggat
ctgtctgtggtgattgacgagtcgatggatgctgaaccaaccattgagaccatcacgctg
gatgacgtgaccgaggacacggctgcccagtttatggaattgcagcaccttcagtatctc
tccgtcacaacagcagactttgaggcagccctcaagagagtgcagccgtctgcgacgcgt
gaagggttcgccacaacgccgtccgtcacctgggacgatgttggcgcattgggcggcccg
cgcagggagcttgaggaggccatcaagttcccgctgcaagcgccagagctgtgtgcgagc
gttggcatccgcaagccaccgggcgtgctgctctatggcccacctggctgcggcaagacg
ctgcttgccaaggcgctcgccaacagctgcaacgcaaacttcatctccatcaagggcccc
gagctgatgaacaagtttgttggtgagagcgagcgcgcagtgcgacagctgttcacccgc
gcaaagacgtcgtcgccgtgtgttgtcttctttgatgagctcgacgcactctgccctcgc
cgcggcgatgcgtcgagttcgcgtgtgtcagaacggatcgtcaaccagctcctcgtggag
ctggacgggtttgactctggcgaggagaagatcttcgtgattggtgccacgaaccgcatc
gacattatcgacccggcaatgctgcgaccaggacgcctcgagaagcttgtgtacgtcgac
ttgcccgaccagcacgcgcgcgcagagattttcaagacgcaggcgcgcaacatcagcctt
gcccccgacgtcgacctcacagctgtggcggcagatagcaggtgccagcagtacaccggt
gcagattctgctgctctcctgcgcgaagcaggaaacgccgcaatctggcgcctccttcaa
gaaaacaaccaggactttgacaagacggcagcgatgcgccccgccatttccacagcagat
ttggaggtcgcaatgcgcaaggtgaagccgtctgtgtcgaagcgcgaccttgcccgctac
cgccgcgtcgccgatgagttcagtcttcgcgagagcagcgcatcgcgacagcacaaggat
gcagacgcagagtag
DBGET
integrated database retrieval system
