Salpingoeca rosetta: PTSG_09406
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Entry
PTSG_09406 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K23002
RNA polymerase II-associated protein 3
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_09406
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PTSG_09406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_11
RPAP3_C
TPR_BSK1_C
TPR_16
TPR_14
TPR_8
TPR_9
TPR_19
Glypican
TPR_12
Motif
Other DBs
NCBI-GeneID:
16070214
NCBI-ProteinID:
XP_004989663
UniProt:
F2UMJ1
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MRAQQEEIAPADTMHDSQMSDMQLRTHMATCEKENGNAQFKAGKYMAAVDCYTRGLDVDP
DNAALYANRAMAHLKLKQYEHVVEDATQALRCDPKYIKAMSRRATANCALNRFDDAMEDW
SAILRLDPNHKQARKELAATKKKKRQYEEDRRRNFNPLQHAAKLRDERLRARDEKPLVRI
PIEEIGTPVNSDDEDGDDDNGGSGSGGDHVSNKAGAVKTTPPTATVSAPASAAGQDKTKN
KDKKTKSKFVMEETSAAPAPASAQSQSPSQSRAKRNVIPVGDIVEKPPAPAPPAPPAPTA
PQAAVAPTTDTHEQKGGSVAKAQQPVTKQEDAAKQMQQGGEATPAAPAAPAAPAAPAAAT
TVTASKQEPSTAASKPAPAALPMRATTATPTSLPSSSSSSSSTSAPSPSSSSSSSSTSAP
STSSSAVAPPQSSAEFLGRLRDTLSSPSQLHALAMSVKPSQLKQFVANQLEAEHVLAMAP
ALAREEQRPVAAFKRLRAVLSAPRADVVLQFLEDEDRSSLYTHAFDLGQRAVVKGAKSLQ
QGDVDATLALLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacagcaagaggagattgcgccagccgacacaatgcacgacagtcagatgtcg
gacatgcagctgcggacccacatggccacgtgcgagaaggagaacggcaatgcgcagttc
aaggcgggcaagtacatggctgcggtggactgctacacgcgcgggctggacgttgatccc
gacaacgccgcgctctacgccaacagggcgatggcgcatctcaagctcaagcagtatgaa
cacgtcgttgaagacgcaacacaagccctccgctgcgatcctaagtacatcaaggctatg
tcgcgccgtgcaacagcaaactgcgctctcaaccgcttcgatgatgcaatggaagactgg
tcagccatccttcgtctggatccgaaccacaagcaggcgcgcaaggagctcgcagccacc
aagaagaaaaagcggcagtacgaggaggaccgccggcggaacttcaatccgcttcaacac
gccgccaaattgcgtgacgagcggctgcgtgcgcgcgacgaaaaaccactggtgcgaatc
ccaattgaggaaattggaacaccagtcaacagcgacgacgaagatggcgatgatgataac
ggtggtagtggtagtggtggtgatcatgtctccaacaaggcaggggcagtgaagacaaca
ccaccaacagcaacagtatcagcaccagcatcagcagcaggacaggataagacgaagaat
aaggacaagaagaccaagagcaagtttgtcatggaggaaacgagtgccgcgccggcgcca
gcatcagcacagtcacagtcgccgtcgcagtcacgggcgaagcggaacgtgattccggtt
ggcgatattgtggagaagccgccagcaccggcaccaccagcaccaccagcaccaacagca
ccacaagcagctgttgcaccaacgacggacacacacgaacagaaaggaggtagtgttgca
aaggcgcagcagccggtcacgaaacaagaggacgccgcgaagcagatgcagcaaggtggc
gaggcaacaccagcagcacctgcagcacctgcagcaccagcagcaccagcagcagcaacc
acggtgacagcaagcaagcaagagccgtcgacagcggcgagcaaacccgcacccgccgcc
ctacccatgcgcgccaccactgctacccctacgtcgctaccatcatcatcatcatcatca
tcatcaacatcagcaccatcaccatcgtcatcatcatcatcatcatcaacatcagcacca
tcaacatcgtcatcagctgttgcgccgccccagtccagtgcagagttccttggacgcctt
cgcgacacgctctcctcgccatcacagctgcatgcactcgccatgtctgtcaagccgtca
cagctcaagcagtttgttgccaaccagcttgaggccgagcatgtgctggccatggcgcct
gcgctggcgcgcgaggagcagcggcctgttgccgcgtttaaacgtcttcgcgctgtcctt
tctgcaccgcgcgccgatgttgtgctgcagttccttgaagatgaagaccgctcctccctg
tacacacacgcgtttgatttgggccagcgcgctgttgtgaagggcgcgaaatcgttgcag
cagggcgatgtggacgccacactcgcgctcctcaagtga
DBGET
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