KEGG   Salpingoeca rosetta: PTSG_09406
Entry
PTSG_09406        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K23002  RNA polymerase II-associated protein 3
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_09406
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     PTSG_09406
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_17 TPR_11 RPAP3_C TPR_BSK1_C TPR_16 TPR_14 TPR_8 TPR_9 TPR_19 Glypican TPR_12
Other DBs
NCBI-GeneID: 16070214
NCBI-ProteinID: XP_004989663
UniProt: F2UMJ1
LinkDB
Position
Unknown
AA seq 552 aa
MRAQQEEIAPADTMHDSQMSDMQLRTHMATCEKENGNAQFKAGKYMAAVDCYTRGLDVDP
DNAALYANRAMAHLKLKQYEHVVEDATQALRCDPKYIKAMSRRATANCALNRFDDAMEDW
SAILRLDPNHKQARKELAATKKKKRQYEEDRRRNFNPLQHAAKLRDERLRARDEKPLVRI
PIEEIGTPVNSDDEDGDDDNGGSGSGGDHVSNKAGAVKTTPPTATVSAPASAAGQDKTKN
KDKKTKSKFVMEETSAAPAPASAQSQSPSQSRAKRNVIPVGDIVEKPPAPAPPAPPAPTA
PQAAVAPTTDTHEQKGGSVAKAQQPVTKQEDAAKQMQQGGEATPAAPAAPAAPAAPAAAT
TVTASKQEPSTAASKPAPAALPMRATTATPTSLPSSSSSSSSTSAPSPSSSSSSSSTSAP
STSSSAVAPPQSSAEFLGRLRDTLSSPSQLHALAMSVKPSQLKQFVANQLEAEHVLAMAP
ALAREEQRPVAAFKRLRAVLSAPRADVVLQFLEDEDRSSLYTHAFDLGQRAVVKGAKSLQ
QGDVDATLALLK
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgcgcgcacagcaagaggagattgcgccagccgacacaatgcacgacagtcagatgtcg
gacatgcagctgcggacccacatggccacgtgcgagaaggagaacggcaatgcgcagttc
aaggcgggcaagtacatggctgcggtggactgctacacgcgcgggctggacgttgatccc
gacaacgccgcgctctacgccaacagggcgatggcgcatctcaagctcaagcagtatgaa
cacgtcgttgaagacgcaacacaagccctccgctgcgatcctaagtacatcaaggctatg
tcgcgccgtgcaacagcaaactgcgctctcaaccgcttcgatgatgcaatggaagactgg
tcagccatccttcgtctggatccgaaccacaagcaggcgcgcaaggagctcgcagccacc
aagaagaaaaagcggcagtacgaggaggaccgccggcggaacttcaatccgcttcaacac
gccgccaaattgcgtgacgagcggctgcgtgcgcgcgacgaaaaaccactggtgcgaatc
ccaattgaggaaattggaacaccagtcaacagcgacgacgaagatggcgatgatgataac
ggtggtagtggtagtggtggtgatcatgtctccaacaaggcaggggcagtgaagacaaca
ccaccaacagcaacagtatcagcaccagcatcagcagcaggacaggataagacgaagaat
aaggacaagaagaccaagagcaagtttgtcatggaggaaacgagtgccgcgccggcgcca
gcatcagcacagtcacagtcgccgtcgcagtcacgggcgaagcggaacgtgattccggtt
ggcgatattgtggagaagccgccagcaccggcaccaccagcaccaccagcaccaacagca
ccacaagcagctgttgcaccaacgacggacacacacgaacagaaaggaggtagtgttgca
aaggcgcagcagccggtcacgaaacaagaggacgccgcgaagcagatgcagcaaggtggc
gaggcaacaccagcagcacctgcagcacctgcagcaccagcagcaccagcagcagcaacc
acggtgacagcaagcaagcaagagccgtcgacagcggcgagcaaacccgcacccgccgcc
ctacccatgcgcgccaccactgctacccctacgtcgctaccatcatcatcatcatcatca
tcatcaacatcagcaccatcaccatcgtcatcatcatcatcatcatcaacatcagcacca
tcaacatcgtcatcagctgttgcgccgccccagtccagtgcagagttccttggacgcctt
cgcgacacgctctcctcgccatcacagctgcatgcactcgccatgtctgtcaagccgtca
cagctcaagcagtttgttgccaaccagcttgaggccgagcatgtgctggccatggcgcct
gcgctggcgcgcgaggagcagcggcctgttgccgcgtttaaacgtcttcgcgctgtcctt
tctgcaccgcgcgccgatgttgtgctgcagttccttgaagatgaagaccgctcctccctg
tacacacacgcgtttgatttgggccagcgcgctgttgtgaagggcgcgaaatcgttgcag
cagggcgatgtggacgccacactcgcgctcctcaagtga

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