KEGG   Salpingoeca rosetta: PTSG_09439
Entry
PTSG_09439        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K14306  nuclear pore complex protein Nup62
Organism
sre  Salpingoeca rosetta
Pathway
sre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PTSG_09439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_09439
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PTSG_09439
SSDB
Motif
Pfam: Nsp1_C Nucleoporin_FG APG6_N FPP GAS CENP-Q ATG17_like MAD EzrA OmpH Crescentin RAP1 Fibin SKA1 TMF_TATA_bd Prominin FlaC_arch DUF3450 DUF1664
Other DBs
NCBI-GeneID: 16070246
NCBI-ProteinID: XP_004989695
UniProt: F2UMM3
LinkDB
Position
Unknown
AA seq 444 aa
MAFKFGGGQQPPQQQQQQQAMPAFGAGQKPGGAPAFGGGGTGGGGLKFGAPKAGNVATPS
PLSKPATTAQPQQGFAFGSKPAQPGTGAPAFGAPKTATTTAPAFGAPKTATTTAPAFGAP
KTATTTAPAFGAPKTATTTAPAFGAPKTATTTAPAFGAPKTATTTAPAFGAPKTSTTTAG
APAFGAPKTATTTAPAFGAPKTATTTADAGTKSTAPAFGAPKTQASGPASGSSSSTAAAP
AKPAFGAPTAQSAKQPPNGSNADPNNMLYKELDKALGKWQKEITDQHAAFTEEVTQLRKR
DGEILANANRIKSLNDEVAHVEKQQKKLKGELETLTKEQEDINGILDELEKSVQGMDVSG
TADHERHRMAATAMQVHETMSKMQDELIKLTTEVNQGAHGDEDDPMRLITETLHNHLATL
TNVERNIDELQNRVQHVENIRGGH
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggccttcaagtttggtggcggacagcagcctccgcagcagcagcaacagcagcaggcc
atgcctgcatttggggctggacaaaaaccaggaggtgcgcctgcttttggcggcggcggt
actggcggcggcgggttgaagtttggtgccccaaaagccggtaatgtggccacaccctcc
cctctgtcaaagcctgccacaaccgcacaaccacaacaaggcttcgcctttggcagcaaa
cctgcacagccaggcacaggtgcacccgcattcggtgctcccaagactgccactaccact
gcaccagcgtttggtgctcccaagactgccacgaccactgcaccggcatttggtgctccc
aagactgccacgaccactgcaccggcatttggtgctcccaagactgccactaccactgca
ccggcgtttggtgctcccaagactgccactaccactgcaccggcatttggtgctcccaag
actgccactaccactgcaccggcgtttggtgctcccaagacttccacaacaacagcaggc
gcacccgcgtttggtgctcccaagactgccacaacaactgcacccgcgtttggtgctcca
aagacagccacgacaacagcagatgcggggacaaagtctactgcgcccgcctttggagca
ccaaagacacaagcgagcggcccggcaagtggttcgtcctcatccacagctgctgcaccc
gccaagcccgcctttggtgcacccactgcgcaaagtgccaagcagccaccaaatggatca
aacgcagacccaaacaacatgctctacaaggagctcgacaaggccctcggcaagtggcag
aaggagattacagaccagcatgcggcgttcacggaggaggtgacgcagctgcggaagcgc
gatggcgagatcctggccaacgccaaccgcatcaagtcgctcaacgacgaggtggcacac
gtcgagaagcagcaaaagaagttgaagggcgaactggagacgctgacgaaggagcaggag
gacatcaacggcattctggatgagcttgagaagagtgtgcaaggcatggacgtgtcgggt
accgcagaccacgaacgccaccgcatggcggcgacggcgatgcaggtgcacgagaccatg
tccaagatgcaggacgagctcatcaagctcacaacagaggtcaaccaaggagcgcacggg
gacgaggacgacccgatgcggctgatcacagagacgctacacaaccatctcgccacactc
acaaacgtcgagcgcaacattgacgagctgcagaacagggtgcagcatgtagagaacatt
cgcggcgggcactaa

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