Salpingoeca rosetta: PTSG_09439
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Entry
PTSG_09439 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_09439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_09439
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_09439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
APG6_N
FPP
GAS
CENP-Q
ATG17_like
MAD
EzrA
OmpH
Crescentin
RAP1
Fibin
SKA1
TMF_TATA_bd
Prominin
FlaC_arch
DUF3450
DUF1664
Motif
Other DBs
NCBI-GeneID:
16070246
NCBI-ProteinID:
XP_004989695
UniProt:
F2UMM3
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MAFKFGGGQQPPQQQQQQQAMPAFGAGQKPGGAPAFGGGGTGGGGLKFGAPKAGNVATPS
PLSKPATTAQPQQGFAFGSKPAQPGTGAPAFGAPKTATTTAPAFGAPKTATTTAPAFGAP
KTATTTAPAFGAPKTATTTAPAFGAPKTATTTAPAFGAPKTATTTAPAFGAPKTSTTTAG
APAFGAPKTATTTAPAFGAPKTATTTADAGTKSTAPAFGAPKTQASGPASGSSSSTAAAP
AKPAFGAPTAQSAKQPPNGSNADPNNMLYKELDKALGKWQKEITDQHAAFTEEVTQLRKR
DGEILANANRIKSLNDEVAHVEKQQKKLKGELETLTKEQEDINGILDELEKSVQGMDVSG
TADHERHRMAATAMQVHETMSKMQDELIKLTTEVNQGAHGDEDDPMRLITETLHNHLATL
TNVERNIDELQNRVQHVENIRGGH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaagtttggtggcggacagcagcctccgcagcagcagcaacagcagcaggcc
atgcctgcatttggggctggacaaaaaccaggaggtgcgcctgcttttggcggcggcggt
actggcggcggcgggttgaagtttggtgccccaaaagccggtaatgtggccacaccctcc
cctctgtcaaagcctgccacaaccgcacaaccacaacaaggcttcgcctttggcagcaaa
cctgcacagccaggcacaggtgcacccgcattcggtgctcccaagactgccactaccact
gcaccagcgtttggtgctcccaagactgccacgaccactgcaccggcatttggtgctccc
aagactgccacgaccactgcaccggcatttggtgctcccaagactgccactaccactgca
ccggcgtttggtgctcccaagactgccactaccactgcaccggcatttggtgctcccaag
actgccactaccactgcaccggcgtttggtgctcccaagacttccacaacaacagcaggc
gcacccgcgtttggtgctcccaagactgccacaacaactgcacccgcgtttggtgctcca
aagacagccacgacaacagcagatgcggggacaaagtctactgcgcccgcctttggagca
ccaaagacacaagcgagcggcccggcaagtggttcgtcctcatccacagctgctgcaccc
gccaagcccgcctttggtgcacccactgcgcaaagtgccaagcagccaccaaatggatca
aacgcagacccaaacaacatgctctacaaggagctcgacaaggccctcggcaagtggcag
aaggagattacagaccagcatgcggcgttcacggaggaggtgacgcagctgcggaagcgc
gatggcgagatcctggccaacgccaaccgcatcaagtcgctcaacgacgaggtggcacac
gtcgagaagcagcaaaagaagttgaagggcgaactggagacgctgacgaaggagcaggag
gacatcaacggcattctggatgagcttgagaagagtgtgcaaggcatggacgtgtcgggt
accgcagaccacgaacgccaccgcatggcggcgacggcgatgcaggtgcacgagaccatg
tccaagatgcaggacgagctcatcaagctcacaacagaggtcaaccaaggagcgcacggg
gacgaggacgacccgatgcggctgatcacagagacgctacacaaccatctcgccacactc
acaaacgtcgagcgcaacattgacgagctgcagaacagggtgcagcatgtagagaacatt
cgcggcgggcactaa
DBGET
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