KEGG   Salpingoeca rosetta: PTSG_09708
Entry
PTSG_09708        CDS       T04136                                 
Name
(RefSeq) WD repeat domain 23
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sre04121]
    PTSG_09708
Ubiquitin system [BR:sre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PTSG_09708
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C WDR54 Beta-prop_WDR75_1st Beta-prop_WDR11_2nd Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 16069605
NCBI-ProteinID: XP_004989063
UniProt: F2UNT7
LinkDB
Position
Unknown
AA seq 642 aa
MDDGREGERRRRSTSDDEVVRGGGSTHQAEDTESDDSSDFIMTVTHTDDDDDEDDEEYDV
VMDVEGEDDSEEDDGVSLADLVADGPSWNLLAALLGRSGDAGLREDSEFMTEEEMQEEEM
EQEQRAQSSGATMHHDNDDDDDDSDDDGKGNGSPFLERAVDGSGSSDEPPRSDYLASHPN
ARLCRPLKAQRLRRRAAAARHGVSRSQHAVHPRIKGTHLHHVLGLSTGMTSVRLGNLHNT
ALIHHEFQRGRLGLKGLQAPHRVYLMREQLPNFCKYKQAQFREHVFCGAYSSNGSMFMSA
CQDDVLRLYDTSRDVWSLRRSVYARDVGWAVVDTCYSPNQMYLIYSSWSNAIRLITLEGD
RHEDLVYNRNNGHTCPFSIRFSQDSSEIVAGVSGGTVVVYDINRDMLHHDFTAHREDVNA
VAFADESTNVFISGSDDAICKVWDRRTIDGSRASPVGAFRGHTHGITFIDSKNDGRYFIS
QGKESSIKLWDMRAMQTEQEAQPPLIRMMDYRWGVRRQPASQRRRLRGDASVMTYTGHLV
SRTLMRARFSPSFSTGQRYVYAGCTTGRVFIWDVLTGAVVSSREVHNGIVRDVSWHPFKP
ILATSSWDGTVKTSTAYMPNTTTAAPQPSMFHTPVLNQDDDE
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggatgacggcagggagggagagcgccgccgtcgcagcaccagcgacgatgaggtggtg
cgtgggggcggctcgacccatcaagccgaggacactgagagtgatgacagcagtgacttc
atcatgacggtgacacacaccgacgacgacgacgacgaggatgacgaggagtacgacgtg
gtgatggatgttgagggcgaagatgacagtgaagaggatgacggtgtctcccttgcagac
cttgttgctgatgggccaagctggaacctcctcgcagcactgctcggccgcagcggtgac
gcaggcctgcgtgaggacagtgagttcatgacggaggaagaaatgcaggaggaggagatg
gagcaggaacagcgagcacagtcgtccggtgccaccatgcaccatgacaacgacgacgat
gacgatgacagtgacgacgatggcaaaggcaatggcagcccattccttgagcgcgccgtt
gatggcagcggcagcagcgatgaacctccgcgctcagattacttggcctcccaccccaat
gccagactgtgccgtcccctcaaagcacagcggcttcgtcgacgtgcagcggcagcacgc
cacggcgtgtctcgcagtcagcacgcagttcaccctcgcatcaagggcacacatctgcac
cacgtcctcggcctgtccacgggcatgacaagcgttcgcctcggcaacctccacaacacc
gcactcattcatcacgagtttcagcggggtcggcttggactgaagggcctgcaggcgcca
caccgcgtgtatctcatgcgggaacagctgccaaacttctgtaaatacaagcaagcgcag
ttccgtgagcacgtgttctgtggcgcgtacagcagcaatggctccatgttcatgagcgca
tgccaagacgatgtgctccggttgtacgacacctcccgggacgtgtggtcccttcgccgc
agcgtgtacgctcgcgatgtcggctgggccgtcgtggacacgtgctactcgccaaaccag
atgtatctcatctactcgtcctggtcaaacgccattcgtctcatcacactcgagggcgac
agacacgaggacctggtgtacaaccgaaacaacggacacacctgcccgttctccatccgc
ttctcgcaggactcgtctgagattgttgctggtgtgagcgggggcacggtagtggtgtat
gacatcaaccgcgacatgttgcatcacgacttcacggcgcacagggaggacgtgaacgcc
gttgcctttgcggacgaatcgaccaacgtcttcatcagcggatcagatgacgcaatctgc
aaggtgtgggaccggagaacaattgacggatcgcgcgcgtcgcccgtcggtgctttccgc
ggacacacacatggcatcaccttcatcgacagcaagaacgacgggcggtattttatttcg
caggggaaggagtcgtcgatcaagctgtgggacatgcgggcgatgcagacagagcaggag
gcgcagccgcccctcatccgcatgatggattatcgatggggcgtgcgcaggcagcccgcg
tcacagcggcgccgtctgcgtggcgatgcgtctgtgatgacatacacggggcacctcgtg
tcgcgtacgctgatgcgcgctcgcttctcgccctcattctccacagggcagaggtatgtg
tatgccggctgcacgacgggccgcgtgttcatctgggatgtgctcacgggcgccgtcgtc
tcaagcagagaggtgcacaacggcattgttcgcgacgtctcttggcatccattcaaacca
atcctcgccacatcctcgtgggatggcacagtcaagacgtccacagcgtacatgcccaac
acaacaacagcagcccctcagccctccatgttccacacgccagtcctcaaccaagacgac
gacgagtag

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