Salpingoeca rosetta: PTSG_09708
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Entry
PTSG_09708 CDS
T04136
Name
(RefSeq) WD repeat domain 23
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sre04121
]
PTSG_09708
Ubiquitin system [BR:
sre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PTSG_09708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
WDR54
Beta-prop_WDR75_1st
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
16069605
NCBI-ProteinID:
XP_004989063
UniProt:
F2UNT7
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MDDGREGERRRRSTSDDEVVRGGGSTHQAEDTESDDSSDFIMTVTHTDDDDDEDDEEYDV
VMDVEGEDDSEEDDGVSLADLVADGPSWNLLAALLGRSGDAGLREDSEFMTEEEMQEEEM
EQEQRAQSSGATMHHDNDDDDDDSDDDGKGNGSPFLERAVDGSGSSDEPPRSDYLASHPN
ARLCRPLKAQRLRRRAAAARHGVSRSQHAVHPRIKGTHLHHVLGLSTGMTSVRLGNLHNT
ALIHHEFQRGRLGLKGLQAPHRVYLMREQLPNFCKYKQAQFREHVFCGAYSSNGSMFMSA
CQDDVLRLYDTSRDVWSLRRSVYARDVGWAVVDTCYSPNQMYLIYSSWSNAIRLITLEGD
RHEDLVYNRNNGHTCPFSIRFSQDSSEIVAGVSGGTVVVYDINRDMLHHDFTAHREDVNA
VAFADESTNVFISGSDDAICKVWDRRTIDGSRASPVGAFRGHTHGITFIDSKNDGRYFIS
QGKESSIKLWDMRAMQTEQEAQPPLIRMMDYRWGVRRQPASQRRRLRGDASVMTYTGHLV
SRTLMRARFSPSFSTGQRYVYAGCTTGRVFIWDVLTGAVVSSREVHNGIVRDVSWHPFKP
ILATSSWDGTVKTSTAYMPNTTTAAPQPSMFHTPVLNQDDDE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggcagggagggagagcgccgccgtcgcagcaccagcgacgatgaggtggtg
cgtgggggcggctcgacccatcaagccgaggacactgagagtgatgacagcagtgacttc
atcatgacggtgacacacaccgacgacgacgacgacgaggatgacgaggagtacgacgtg
gtgatggatgttgagggcgaagatgacagtgaagaggatgacggtgtctcccttgcagac
cttgttgctgatgggccaagctggaacctcctcgcagcactgctcggccgcagcggtgac
gcaggcctgcgtgaggacagtgagttcatgacggaggaagaaatgcaggaggaggagatg
gagcaggaacagcgagcacagtcgtccggtgccaccatgcaccatgacaacgacgacgat
gacgatgacagtgacgacgatggcaaaggcaatggcagcccattccttgagcgcgccgtt
gatggcagcggcagcagcgatgaacctccgcgctcagattacttggcctcccaccccaat
gccagactgtgccgtcccctcaaagcacagcggcttcgtcgacgtgcagcggcagcacgc
cacggcgtgtctcgcagtcagcacgcagttcaccctcgcatcaagggcacacatctgcac
cacgtcctcggcctgtccacgggcatgacaagcgttcgcctcggcaacctccacaacacc
gcactcattcatcacgagtttcagcggggtcggcttggactgaagggcctgcaggcgcca
caccgcgtgtatctcatgcgggaacagctgccaaacttctgtaaatacaagcaagcgcag
ttccgtgagcacgtgttctgtggcgcgtacagcagcaatggctccatgttcatgagcgca
tgccaagacgatgtgctccggttgtacgacacctcccgggacgtgtggtcccttcgccgc
agcgtgtacgctcgcgatgtcggctgggccgtcgtggacacgtgctactcgccaaaccag
atgtatctcatctactcgtcctggtcaaacgccattcgtctcatcacactcgagggcgac
agacacgaggacctggtgtacaaccgaaacaacggacacacctgcccgttctccatccgc
ttctcgcaggactcgtctgagattgttgctggtgtgagcgggggcacggtagtggtgtat
gacatcaaccgcgacatgttgcatcacgacttcacggcgcacagggaggacgtgaacgcc
gttgcctttgcggacgaatcgaccaacgtcttcatcagcggatcagatgacgcaatctgc
aaggtgtgggaccggagaacaattgacggatcgcgcgcgtcgcccgtcggtgctttccgc
ggacacacacatggcatcaccttcatcgacagcaagaacgacgggcggtattttatttcg
caggggaaggagtcgtcgatcaagctgtgggacatgcgggcgatgcagacagagcaggag
gcgcagccgcccctcatccgcatgatggattatcgatggggcgtgcgcaggcagcccgcg
tcacagcggcgccgtctgcgtggcgatgcgtctgtgatgacatacacggggcacctcgtg
tcgcgtacgctgatgcgcgctcgcttctcgccctcattctccacagggcagaggtatgtg
tatgccggctgcacgacgggccgcgtgttcatctgggatgtgctcacgggcgccgtcgtc
tcaagcagagaggtgcacaacggcattgttcgcgacgtctcttggcatccattcaaacca
atcctcgccacatcctcgtgggatggcacagtcaagacgtccacagcgtacatgcccaac
acaacaacagcagcccctcagccctccatgttccacacgccagtcctcaaccaagacgac
gacgagtag
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