Salpingoeca rosetta: PTSG_10088
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Entry
PTSG_10088 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14830
protein MAK11
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_10088
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PTSG_10088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
CDC45
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
16069541
NCBI-ProteinID:
XP_004988999
UniProt:
F2UPG3
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MARRKGKRAAAQRGVKKEEEEEEQVAEMDVVADVREEEVEEEEVKDDESSGEEQQEHEEY
LDEESDDAEEDDAEDDEDDNDQENEDDEDEDIVSTFKLTKGGKAERSGQAGQGDDGAVRL
CMCAGTYEHALYGYDCYVKRNPEDPVDATACRFSKTFVLEAHTAIVSAIGSGGRFVITGS
VDEQLRVFDVKKKVEVGLLTLHEGTITGIAFHEGSNVITAADDGVLCIWDTQDWVNLKTL
KGHKGGITSVAVHPSGKIALSLSRDRTLRIWNLLKGRCAFTATLSQVGEQVLWSPDGTKY
VIISNDKVEVFSMATSAIICSFESPCRVNGAAFVDSRHLAFGGYSPVLYVVDVDTSAIVT
AFPAHETRIKSVQSGPRNADHSTYVVMTADSNGIIKAWSCRDLLEAGVQMDDAQDDDDDD
DDDDDDDDDDDNGDTSDGAAVEGAPANRGSDKADNNDDDDADANDNNSSSSNNNSGDDDE
GATAAVRREVVPLAVVNTFSRVTCMTVSAPFSSRTQRTAMQQVKAKVKRELMEGMRDEAS
AAKTLQALRDRVANREAADAKKRGKRPNEIEVVPVDTPAGGRGAHGRDGTAANAAAAAAA
VKRAVAKGQVLKKDRRQKTDKRKHKHRNGDDGAGGGDGQGVKKKAKRTPQHRQRGNSGPH
ADNGSKPTRGAGRSRGKGMAFRRKKKQQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcaagggcaagagggctgctgctcaacgcggggtgaagaaagaggaggag
gaggaggaacaggttgcggagatggacgttgtcgcggacgtgagggaagaggaggtggag
gaggaggaagtgaaggacgacgagagcagtggcgaagaacaacaagaacacgaggagtat
ttggacgaggaaagcgatgatgcagaggaagacgatgcagaagatgacgaagatgacaat
gaccaggagaatgaggatgacgaggatgaggacatcgtgtctacattcaagttgacgaaa
ggcggcaaggccgaacgcagtggtcaggccggtcaaggtgatgacggagctgtgcgcctg
tgcatgtgcgcgggcacgtacgagcatgcgctctatgggtatgactgctacgtgaagcgc
aaccccgaggatcccgtggacgccactgcgtgccggttcagcaagacgtttgtgcttgag
gcccacaccgccatcgtctctgccattgggtctggtggccgctttgtcattacgggcagc
gtcgacgagcagctcagggtgtttgatgtgaagaagaaggttgaggttgggctcttgacg
ctgcacgagggcaccatcacgggcattgcgtttcacgaaggatccaacgtgatcactgcg
gcggatgacggcgtgctttgcatctgggacacccaagattgggtcaacctcaagaccctc
aagggccacaagggcgggatcacgtcggtggccgtgcatccgtctggcaagattgcgctg
tcgctgtcccgtgaccgcaccctgcgtatctggaacctcctcaagggacgctgcgccttc
accgcaacgctcagccaagttggcgagcaggtgctgtggtcgcctgacggcacaaaatac
gtcatcatcagcaacgacaaagtggaggtgttctccatggccaccagcgccatcatctgc
agctttgaaagcccctgcagggtcaacggcgcagcgtttgtcgactcgcgccaccttgcg
tttggcgggtacagccctgtgctgtatgtcgtcgacgttgacacatccgccattgtcacc
gcgtttcctgcacacgagacaaggatcaagagcgtacagtctggtccgcgcaacgccgat
cacagcacatatgtcgtcatgacggccgactccaatggcatcatcaaggcgtggtcgtgt
cgggatttgcttgaggccggcgtgcaaatggacgacgctcaggatgatgatgatgatgat
gatgatgatgatgatgatgatgacgatgatgacaacggtgacactagtgatggtgcagct
gtggagggtgctccggcaaatagaggcagtgacaaagccgacaacaacgacgacgacgat
gctgacgcaaatgacaacaacagcagcagcagcaacaacaacagtggtgatgacgatgag
ggtgccacggctgcggtgaggcgagaggttgtgccactggctgttgtcaacacgttttcg
cgcgtgacgtgcatgacggtgagcgcgccgttttcgtcgcgcacgcagcgcacagcgatg
cagcaggtgaaggcgaaggtgaagcgagagctgatggagggcatgcgtgacgaggcctcg
gctgcgaagacactgcaggcgttgcgggaccgtgttgcgaacagggaggcggcagacgcg
aagaagaggggcaagcgccccaacgagattgaggttgtgcccgtggatacaccagctggt
gggcggggtgcacacggccgtgacggtaccgctgcaaacgctgctgctgctgctgctgcc
gtgaagcgagcggtggccaaggggcaggtgctgaagaaggacaggaggcagaagacagac
aagcgcaagcacaagcacaggaacggtgatgatggtgctggtggtggtgatgggcagggc
gtgaagaaaaaggcaaagaggacgccccagcataggcagcgaggcaacagcggcccacac
gctgacaacggtagcaagcccacgcgtggtgcagggagaagcaggggtaaaggaatggca
tttcgtcgcaagaagaagcagcagtag
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