Salpingoeca rosetta: PTSG_10190
Help
Entry
PTSG_10190 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
sre
Salpingoeca rosetta
Pathway
sre03410
Base excision repair
sre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PTSG_10190
03450 Non-homologous end-joining
PTSG_10190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_10190
Enzymes [BR:
sre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTSG_10190
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
PTSG_10190
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
PTSG_10190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
NTP_transf_2
Cdd1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
16069058
NCBI-ProteinID:
XP_004988528
UniProt:
F2UQK2
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MESKRAKLAKKKAFLEGVHAVLTKSAYESAAHARRRAAVIAKAGGTCTMEPTDETNVVLC
SETTTKAEAMERIKQGKDLGGKPPPEAAHWVTTAWLTECVKAKTFIPYDCFTVRSGAPAP
VGESGSSAAETGSPSRQPLRHRSSSASSTSSQRSALQHINSNGDYFPASGSPSRTTSNDN
NPARALDVGPMSSTLTVNDTHPRSSEQTALISTAGAATHATAAATEPSASASASASASAS
ASQPSSATQSPAALVARSQRVVGTSPEEIELPPAWEAIYHCYNCGAKDHGARTCPLPPRG
TPENTYVPGFPGARKRVSREWMCARSHGHRKDRQGAGPNDLIISNLEKLHDTYADYGTWL
HQLKASNLHTALAFIRRMKEPITTYEQARRIPKVGNETAKKIDEILSTGTLQRLEAFDTP
EKRAQHEFSQIYGVGTATAKQFVAKGFRTIQDLLDNQHELTERQRIGVRLHQELQERIPR
TEVDRMVAHVKHVVLSIEPGCIFEACGSYRRGKKTCGDVDVLISHRDKRVLDTLFKRVID
ALHDDGFLTHDLARSEGESTQYKYMGIGKLKDASFHRRVDIIVVPWEEWPCAILYFTGSG
AFNRSMRLLARKMGWSLSQHTINYGVVRDRKEKDKKLGDGSVIPVKSEHDVFALLALKYR
PPWERNA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaagcgtgccaagcttgccaagaagaaagccttcttggaaggggtgcatgcc
gtgttgacaaagagtgcttatgagagcgccgcacacgcacggcgacgagccgctgtcatc
gccaaagccggcggcacgtgcaccatggaaccaacagacgagaccaacgtggtgctttgc
tctgagacgacaacaaaggcagaggccatggagcgcatcaagcaaggcaaggacctgggc
gggaagcctccaccagaggcagcacactgggtcaccacggcgtggttgacagaatgtgtc
aaggcaaagacattcattccttacgactgcttcacagttcggagcggggcgcctgcgcct
gttggagagagtggtagttcagcagcagagacgggctcgccatcacgacagccactgcgg
caccgcagctcatctgcgtcatcgacatcgtcccaacgcagcgcattgcagcacatcaac
agcaatggcgactacttccccgcgtccggcagccccagtcgcacaaccagcaacgacaac
aacccagcacgagcgctggatgttggccccatgtcctctacattgactgtgaacgacacg
cacccgcgtagcagcgaacaaacggcgctcatatccactgctggcgctgccacacacgca
acagcggcggcgacggaaccatcagcatcagcgtcagcatcggcgtcggcatcggcgtcg
gcatcacagccatcatctgcaacccagagcccggcagcgctggttgcgcgctcacaacgc
gtcgtcggcacatcaccagaggagattgaactgccgccagcgtgggaggcgatataccac
tgctacaactgcggcgcgaaagaccacggcgcacgcacgtgcccgctcccgccacggggc
acgcccgagaacacgtatgtgcccggttttcccggtgcgcggaagcgtgtgtcgcgcgag
tggatgtgtgctcggtcgcacggacacaggaaggaccgccagggcgccggcccaaacgac
ctcatcatctccaacctcgagaaactccatgacacctatgctgactacggcacttggttg
caccagctgaaggcgagcaacttgcacacggcgcttgcgttcattcgacgcatgaaggag
cccatcaccacatatgagcaggcgcgcaggatccccaaggttggcaacgagacggcaaag
aagattgacgaaatcctctccacgggcacgctgcagcggttagaagcctttgacacgccc
gaaaaacgtgcacagcacgaattcagccagatctacggtgtgggcaccgcgacggctaag
cagtttgtcgccaagggcttcagaaccatccaggacttgcttgacaaccagcatgagctg
acggagcgtcagcgcattggcgtgcgattgcatcaggagctgcaagagagaataccccgg
acagaggtggacaggatggttgcacatgtcaagcacgttgtcctctccatcgagcccggc
tgcatcttcgaagcatgcggctcataccgccgcgggaagaagacgtgcggagatgttgat
gtgttgatatcgcaccgggacaagcgcgtgttggacacgctattcaaacgcgtcattgat
gcgctgcacgatgacggattcctgacccacgaccttgcgcgctcagagggcgaatcaaca
cagtacaagtacatgggcattggcaagctcaaagacgcgtcctttcatcgccgtgtggat
atcatcgttgtgccgtgggaggaatggccgtgcgccatcctgtactttacgggctccggc
gcctttaaccgctccatgcgtctccttgcacgcaagatgggctggtccctcagccagcac
acgatcaactacggggtggttcgagacaggaaggagaaagacaagaagttgggggacggc
agcgtgatccccgtcaagtcggagcacgacgtctttgccctcctcgccctcaaataccgc
ccgccctgggaacgcaacgcttga
DBGET
integrated database retrieval system