KEGG   Salpingoeca rosetta: PTSG_10190
Entry
PTSG_10190        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
sre  Salpingoeca rosetta
Pathway
sre03410  Base excision repair
sre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PTSG_10190
   03450 Non-homologous end-joining
    PTSG_10190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_10190
Enzymes [BR:sre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PTSG_10190
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     PTSG_10190
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     PTSG_10190
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 HHH_5 BRCT_2 NTP_transf_2 Cdd1 zf-CCHC
Other DBs
NCBI-GeneID: 16069058
NCBI-ProteinID: XP_004988528
UniProt: F2UQK2
LinkDB
Position
Unknown
AA seq 667 aa
MESKRAKLAKKKAFLEGVHAVLTKSAYESAAHARRRAAVIAKAGGTCTMEPTDETNVVLC
SETTTKAEAMERIKQGKDLGGKPPPEAAHWVTTAWLTECVKAKTFIPYDCFTVRSGAPAP
VGESGSSAAETGSPSRQPLRHRSSSASSTSSQRSALQHINSNGDYFPASGSPSRTTSNDN
NPARALDVGPMSSTLTVNDTHPRSSEQTALISTAGAATHATAAATEPSASASASASASAS
ASQPSSATQSPAALVARSQRVVGTSPEEIELPPAWEAIYHCYNCGAKDHGARTCPLPPRG
TPENTYVPGFPGARKRVSREWMCARSHGHRKDRQGAGPNDLIISNLEKLHDTYADYGTWL
HQLKASNLHTALAFIRRMKEPITTYEQARRIPKVGNETAKKIDEILSTGTLQRLEAFDTP
EKRAQHEFSQIYGVGTATAKQFVAKGFRTIQDLLDNQHELTERQRIGVRLHQELQERIPR
TEVDRMVAHVKHVVLSIEPGCIFEACGSYRRGKKTCGDVDVLISHRDKRVLDTLFKRVID
ALHDDGFLTHDLARSEGESTQYKYMGIGKLKDASFHRRVDIIVVPWEEWPCAILYFTGSG
AFNRSMRLLARKMGWSLSQHTINYGVVRDRKEKDKKLGDGSVIPVKSEHDVFALLALKYR
PPWERNA
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggagagcaagcgtgccaagcttgccaagaagaaagccttcttggaaggggtgcatgcc
gtgttgacaaagagtgcttatgagagcgccgcacacgcacggcgacgagccgctgtcatc
gccaaagccggcggcacgtgcaccatggaaccaacagacgagaccaacgtggtgctttgc
tctgagacgacaacaaaggcagaggccatggagcgcatcaagcaaggcaaggacctgggc
gggaagcctccaccagaggcagcacactgggtcaccacggcgtggttgacagaatgtgtc
aaggcaaagacattcattccttacgactgcttcacagttcggagcggggcgcctgcgcct
gttggagagagtggtagttcagcagcagagacgggctcgccatcacgacagccactgcgg
caccgcagctcatctgcgtcatcgacatcgtcccaacgcagcgcattgcagcacatcaac
agcaatggcgactacttccccgcgtccggcagccccagtcgcacaaccagcaacgacaac
aacccagcacgagcgctggatgttggccccatgtcctctacattgactgtgaacgacacg
cacccgcgtagcagcgaacaaacggcgctcatatccactgctggcgctgccacacacgca
acagcggcggcgacggaaccatcagcatcagcgtcagcatcggcgtcggcatcggcgtcg
gcatcacagccatcatctgcaacccagagcccggcagcgctggttgcgcgctcacaacgc
gtcgtcggcacatcaccagaggagattgaactgccgccagcgtgggaggcgatataccac
tgctacaactgcggcgcgaaagaccacggcgcacgcacgtgcccgctcccgccacggggc
acgcccgagaacacgtatgtgcccggttttcccggtgcgcggaagcgtgtgtcgcgcgag
tggatgtgtgctcggtcgcacggacacaggaaggaccgccagggcgccggcccaaacgac
ctcatcatctccaacctcgagaaactccatgacacctatgctgactacggcacttggttg
caccagctgaaggcgagcaacttgcacacggcgcttgcgttcattcgacgcatgaaggag
cccatcaccacatatgagcaggcgcgcaggatccccaaggttggcaacgagacggcaaag
aagattgacgaaatcctctccacgggcacgctgcagcggttagaagcctttgacacgccc
gaaaaacgtgcacagcacgaattcagccagatctacggtgtgggcaccgcgacggctaag
cagtttgtcgccaagggcttcagaaccatccaggacttgcttgacaaccagcatgagctg
acggagcgtcagcgcattggcgtgcgattgcatcaggagctgcaagagagaataccccgg
acagaggtggacaggatggttgcacatgtcaagcacgttgtcctctccatcgagcccggc
tgcatcttcgaagcatgcggctcataccgccgcgggaagaagacgtgcggagatgttgat
gtgttgatatcgcaccgggacaagcgcgtgttggacacgctattcaaacgcgtcattgat
gcgctgcacgatgacggattcctgacccacgaccttgcgcgctcagagggcgaatcaaca
cagtacaagtacatgggcattggcaagctcaaagacgcgtcctttcatcgccgtgtggat
atcatcgttgtgccgtgggaggaatggccgtgcgccatcctgtactttacgggctccggc
gcctttaaccgctccatgcgtctccttgcacgcaagatgggctggtccctcagccagcac
acgatcaactacggggtggttcgagacaggaaggagaaagacaagaagttgggggacggc
agcgtgatccccgtcaagtcggagcacgacgtctttgccctcctcgccctcaaataccgc
ccgccctgggaacgcaacgcttga

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