Salpingoeca rosetta: PTSG_10697
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Entry
PTSG_10697 CDS
T04136
Name
(RefSeq) DNA topoisomerase III
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sre
Salpingoeca rosetta
Pathway
sre03440
Homologous recombination
sre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PTSG_10697
03460 Fanconi anemia pathway
PTSG_10697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sre03032
]
PTSG_10697
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_10697
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PTSG_10697
DNA replication proteins [BR:
sre03032
]
Eukaryotic type
DNA Topoisomerases
PTSG_10697
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
PTSG_10697
FA (Fanconi anemia) pathway
PTSG_10697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-GeneID:
16069198
NCBI-ProteinID:
XP_004988662
UniProt:
F2UQ44
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MPFALMVAEKPAVARGIAGILAPGSTSKSTQAQYVRLYEFQTHINGQMWDIRLTAVCGHL
MGWDFDDAHRKWRSSPPESLFDAPLQMTSHGGGDNGDNNKKILGVLQRHVRGCQMVLIAT
DSDREGENIGFEIIEACRKTNKRFIAKRMRFSAVTPAEINNSLRNLTPPDQRLSDYRERE
RFIPEDFWRIIAKHRCEEMTVDFNWSRYRVYDEDVCSVFLELCEDAKIATVTNVTGEFEM
CRPRDKWRPVGLTTTELQKIASRRFRMAPTEALSTAESLYQKGLISYPRTETDMFDKSIN
LTRLVENLTAHTEWGAFAQTLVPPNGAPSPRNGRNTDEAHPPIHPTKNIAPAALASDKER
KIYELVCRHFLACVSRNAKGRETTVTITAAGETFVAKGLAIHDRGYLEVYHPFDSWKGKM
IPDYSVGQQFEPDFQMQSGETVAPKLLSEADLLTLMAKYEIGTDATMAEHIRTIQQRHYV
ELTPQRELVPTTLGIALVNGYDAMSFTISVSRPDLRREMEANMKRICRGQISKDDVIRDG
IEKYRNVFSVVKREVHKLDAAMAEQLGPPNGRPGEVPVAVRRCPACNQADQVLRRTAQGK
YMIGCTRYPACRASVWLQNLAECAVDADTCARCGATKLKMKFKPNTLPPYIQRGRSNIVA
CLCDSELSLYLDGGGGGGGGGGGGGRTTTAASGTTGATTSGRGRGTTTAVATRPPATSSR
ANGTRGAKRSGDQRTQTGSRAANTSSSKRSKQQQQQRGRRGSDGDDVVVVDEDSLDWAAL
DEMLDNDSHTDDHNSAQRNRSSTGGGGGDDDDDAAELAMLLDEDDRHNGHEDDGWNGFGD
GVSGGRDGGHDNSFGNGFDATTRRRDERYLNSGRSRMLHGHGHPDGAGMTLTRDRRRQGR
DDGGGGGGGGGGGGGGMYGGGRGRGGGGGHGDDDGDDEARPVCDCGAEAIKLTARSEQNS
GRAFFKCNNRNDDGSNACNFFQWADERGPPCSCNRPSVRLECKNGSNSGRIMFRCVRRDD
QQCDFFQWEDEQQQRGGGGFRMHGDASNNTTGEGGGNMSASRAGDTVMCGCGQPAPLKTV
TKEGPNKGRQFYCCCRPYGAQDNCSFFMWADDDNDDGDDAAPGTRSMFSGAESNLKR
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgcgttgatggtggcggagaagccagccgtggctcgaggaatcgcgggcatc
ttggcgccaggcagcaccagtaaatcgacgcaggcgcagtatgtgcggctgtacgagttt
cagacgcacatcaacggccagatgtgggacatccgcctcaccgccgtgtgcggccatctc
atgggctgggactttgacgatgcccaccgcaagtggcgaagcagcccgccagagagcctc
tttgacgctccgctgcagatgacctcacatggcggcggcgataacggcgacaacaacaag
aagatcctgggtgtgctgcagcggcacgtgcgcgggtgccagatggtgctgattgccacc
gacagcgatcgcgaaggggagaacatcggctttgaaatcatcgaggcgtgcaggaaaacc
aacaagagatttatcgctaaacgcatgcgcttctcggccgtcacacccgctgagatcaac
aactccctgcgcaatcttactccgccagaccagcgcctctcagactatcgcgagcgggag
cggtttattcccgaggacttttggcgcatcatcgcgaagcaccgatgcgaggagatgacg
gttgacttcaactggtcacggtatcgcgtgtatgacgaggacgtgtgcagcgtcttcctc
gaactctgcgaggacgcaaagatcgcaaccgtcaccaacgtcacaggcgagttcgagatg
tgtcgtccgcgcgacaagtggcggcccgtcggcctcacaaccaccgagctgcagaagatt
gcgtcacgccgattccgcatggcgccaacagaagcgctgagcacggcagagtcgctgtac
caaaagggtctcatttcttatccgcgcacggagacggacatgtttgacaagagcatcaac
ctgacgcgactggtggagaacctcacggcgcacacggagtggggcgcctttgcacagacg
ctggtaccgccaaacggggcgccgagcccacgcaacgggcgcaacaccgacgaggcgcat
cctccaatccacccgaccaagaacatcgcgcccgccgcactcgcatcggacaaggagcgg
aagatctacgagcttgtgtgccggcacttcctcgcgtgtgtgtcgcgaaacgcgaaagga
cgcgagacgacagtcaccatcaccgcggccggagaaacgtttgttgccaaaggtttggcc
attcatgacaggggctacctcgaagtctaccacccgtttgactcgtggaagggcaagatg
attcccgactactcggttgggcagcagtttgaaccagactttcagatgcaatctggggag
acggtggcgccgaagctgctctcagaggccgatctcctgaccctcatggcaaaatacgaa
atcggcacggatgcgacgatggccgagcacattcggacaattcagcagcggcactacgtt
gaactgacgccacagcgcgaactcgtgcccaccaccctcggcatcgccttggtcaacggc
tatgatgccatgagtttcaccatctccgtctcgcgtccggatctcaggcgcgaaatggaa
gcgaacatgaagaggatttgtcgaggacaaatttcaaaagacgatgtcattcgtgacggt
attgaaaagtataggaacgtcttcagcgtcgtcaaacgagaggtgcacaaactcgatgcc
gccatggccgaacagctcggtcctccaaacggccgtccaggggaggtgcccgttgctgtt
cgccgctgtcccgcgtgcaaccaagctgaccaggtgcttcgacggacggcgcaggggaaa
tacatgattggctgcacgcggtacccagcgtgtcgggcgagcgtgtggctgcagaacctg
gccgagtgtgcggtggacgcggacacatgtgcacgatgcggtgcaaccaaactcaagatg
aagttcaagccaaacactcttcccccatacattcagcgcggccggtccaatatcgtcgcg
tgtctgtgcgacagtgagctctccctctacctcgatggtggtggtggaggtggaggtggt
ggtggaggtggaggtcgaaccacaacagcagcatcaggaacaacaggagcaacaacgtct
ggaaggggtcggggaacaacaacagcagtagcaacacgaccgccagcgacatcaagccgt
gcaaacggtacacgtggcgcaaagaggagcggggaccagagaacacagacgggatcaagg
gcagccaacacatcgtcctccaaacgaagcaaacagcagcagcagcagcgagggaggagg
ggcagtgatggcgatgatgtggtggtggtggatgaggattccttggactgggcagcactt
gacgagatgcttgacaacgactcccacacggacgaccacaacagcgcacaacggaaccgc
agttccactggcggtggtggtggtgacgatgatgatgacgcggctgaacttgcaatgttg
cttgatgaagatgacagacacaacggccacgaggatgatggctggaatggatttggcgat
ggtgttagtggcggtcgtgatggtgggcacgataacagctttgggaatgggtttgacgca
acgacccgtcggcgtgatgaacgatacctcaacagcggacggtcgcgaatgcttcacggc
cacggccacccggacggcgctggcatgacgctcacgcgcgatcgaaggcgacagggacgc
gatgatggtggtggtggtggtggtggcggtggtggtggtggtggtggcatgtacggagga
ggacgaggaagaggtggtggtggtggacatggagatgatgatggtgatgacgaggcgcgc
cctgtttgtgattgcggcgctgaggcaatcaagcttacggcgcgcagtgaacagaacagc
gggcgcgcgtttttcaagtgcaacaaccgaaatgatgacggcagcaacgcgtgcaacttc
ttccagtgggcagacgagcgtggcccgccgtgctcgtgcaaccgcccctctgttcggttg
gagtgcaagaacggcagcaactccggtcgcatcatgttccgctgcgtgcggcgcgacgac
cagcaatgcgacttcttccaatgggaggacgagcagcagcaacgtggcggtggtggtttc
cgtatgcacggcgatgcttccaacaacacaacgggagaaggaggaggaaacatgagtgcc
agtcgcgctggcgacaccgtcatgtgtggctgtggacaaccggccccgctcaagaccgtc
acaaaggaggggccaaacaagggtcgccagttctactgctgctgccggccgtacggcgcg
caggacaactgctcgttcttcatgtgggccgatgacgacaatgacgacggtgacgacgcc
gctcccggcactcgcagcatgttcagtggcgcagagagcaacttgaaacggtaa
DBGET
integrated database retrieval system
