KEGG   Salpingoeca rosetta: PTSG_10766
Entry
PTSG_10766        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K12821  pre-mRNA-processing factor 40
Organism
sre  Salpingoeca rosetta
Pathway
sre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTSG_10766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_10766
Spliceosome [BR:sre03041]
 Complex A
  U1 snRNP components
   U1 related factors
    PTSG_10766
 Complex B
    PTSG_10766
SSDB
Motif
Pfam: FF WW FF_RHG35_4th WW_TCERG1 DUF4854
Other DBs
NCBI-GeneID: 16069265
NCBI-ProteinID: XP_004988730
UniProt: F2UQB3
LinkDB
Position
Unknown
AA seq 725 aa
MSHPPPFGFPPRGAPPPMMYGGPPPGPFPPPQGPPGYPMPPPPGPYGPPPVPPAGHAPPP
HAQADPWRKATAPDGREYWYHVVTNETRWERPEAAKPATPWREYKTPEGRPYYYNTETKE
TVWQKPKELEAAESGKAPAPSSASTTTTTTKTAAAAVTAAAAGGGGGGGEKQKKEEKGSK
SSEPREYATKEEAVAAFVELLEDKDVSTNWNWDKVSRVISGDGRYMALKRISEKKHQWNK
WKQAKVVQERETARARSQQAREEFKQLLMDMRAVGPHASYDDALPLFKHEPAYFAVRSER
ERQSVYDDVVKSKQRAALKTFDDRVHEIRSAFLDLIRAIPGFNVEWTWDKTMDYLEGVEH
FTANEMFKEDMLACLEAFEKEMERLDSEFHAKIREEKDSMQRKERKNRDAFVALLDELEE
HGQLHAETLWRTLYPDVCKDARYLALLGQPGSTALDLFKLRQEKLVDRLRRDRRTVRTLF
KEKGFEVTVNTTAEQYLEALQNEESTADISAVNMKFIFEYLLEKAEERERQAKREELRRN
KRALKEQLDALKSKFTKASPWSEVKPLVEEAAPDLLSTMGEEDHAHVYKKFVRKDPWRKD
AKEKGSKKENKDEDDKGSGSSSSSSSSSSSESDGDDDDKESRSSRRKSRGKHDSDEEDDH
HRSSRKKRSKKSKKKKRRHRHSDHDDDDDADDAAGVGDDKHHRRHRRHRRHTSRSRSRTP
TRSKR
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgagccatccaccacctttcgggtttccacctcgtggtgcaccaccacccatgatgtat
ggtggcccgcctccggggccgttcccaccaccacaggggccgccggggtacccaatgccg
ccaccgcctgggccgtatggtccaccgccagtgccacccgctggccatgcaccgccgcca
cacgcacaggccgacccttggcgcaaagccacagcaccggatggtcgtgagtactggtat
catgtggtgacaaacgagacacgctgggagcggccagaagcggcaaagccagccacgccc
tggcgcgagtacaagacaccggagggtcggccatactactacaacacagagacaaaggaa
actgtgtggcagaagccaaaggagcttgaggcggccgagtcaggaaaggcgccggcgccg
tcatcagcatcgactacaacaacaaccacgaaaactgctgctgctgctgttactgctgct
gctgctggtggtggtggtggtggtggtgagaagcagaagaaggaggagaaaggcagcaaa
tcgagcgagccgcgggagtatgcgacgaaggaggaggcggtggcggcgtttgttgagctg
ttggaggacaaggacgtcagcaccaactggaactgggacaaggtgagccgggtgattagt
ggggacgggcggtacatggcgctcaagcggatcagcgagaagaagcaccagtggaacaag
tggaagcaggcaaaggtcgtccaggaacgcgagacagcgcgtgcgcggtcgcagcaggcg
cgggaggagtttaagcagctgctcatggacatgcgggccgttggtccgcacgcatcatat
gacgacgccctcccgctcttcaagcacgagccggcgtactttgccgtccgatcagaacgc
gaacgacagagcgtgtacgatgatgtagtgaagtcaaagcagcgggcggcgctgaagacg
tttgatgaccgcgtgcacgagatcagatccgcatttctcgacctcattcgcgccatccca
ggattcaacgttgagtggacgtgggacaagacgatggactatctcgagggcgtcgagcac
ttcaccgcaaacgaaatgttcaaggaggacatgcttgcgtgcttggaggcgtttgagaag
gagatggagcgactggacagcgaattccacgcgaagatccgcgaagaaaaggactcaatg
cagcgcaaggagcgcaagaacagagacgcgtttgtggcgctgcttgatgagttggaggag
cacgggcagctgcacgcggagacgctatggcgtaccctctaccctgacgtctgcaaggat
gcacggtacctggcgctgttgggtcagcccgggagcacggcgctggatctgttcaaactc
cgacaggagaaactcgtcgaccgcctccgtcgcgaccgtcggaccgtcaggactctcttc
aaggagaagggatttgaggtgacggtcaacacaacggcagagcagtacctcgaggcactc
cagaatgaggagagcacggcggacatttctgcggtgaacatgaagttcatctttgagtat
ctgctcgaaaaggccgaagagcgcgagcgccaagcaaagagagaggagctgaggaggaac
aagcgtgcacttaaggaacaactcgacgccctcaagtccaagttcacgaaagcgtcaccg
tggtcggaggtgaagccgcttgttgaagaggcggcaccggacctgctgtccaccatgggt
gaggaggaccacgcacacgtgtacaagaagtttgtgcgcaaggacccgtggaggaaggat
gcaaaggagaagggatccaagaaggagaacaaggacgaagatgacaagggctcaggctct
tcctcctcctcatcgtcatcatcatcgtcggagagtgatggtgatgatgacgacaaggag
tccaggtcgagccggcgcaagtcgcgtggaaagcacgactctgatgaggaggacgaccac
caccgctcatcgcgcaagaagcgctcaaagaagtccaagaagaagaagcgacgtcaccgt
cacagcgaccacgacgatgacgacgatgctgacgatgctgctggtgttggcgatgacaaa
caccaccgccgccaccgccgccaccgccgccacacgtcccgctcgcggtcgcgcacccca
acacgctccaagcgctag

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