Salpingoeca rosetta: PTSG_10766
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Entry
PTSG_10766 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
sre
Salpingoeca rosetta
Pathway
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_10766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_10766
Spliceosome [BR:
sre03041
]
Complex A
U1 snRNP components
U1 related factors
PTSG_10766
Complex B
PTSG_10766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
DUF4854
Motif
Other DBs
NCBI-GeneID:
16069265
NCBI-ProteinID:
XP_004988730
UniProt:
F2UQB3
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MSHPPPFGFPPRGAPPPMMYGGPPPGPFPPPQGPPGYPMPPPPGPYGPPPVPPAGHAPPP
HAQADPWRKATAPDGREYWYHVVTNETRWERPEAAKPATPWREYKTPEGRPYYYNTETKE
TVWQKPKELEAAESGKAPAPSSASTTTTTTKTAAAAVTAAAAGGGGGGGEKQKKEEKGSK
SSEPREYATKEEAVAAFVELLEDKDVSTNWNWDKVSRVISGDGRYMALKRISEKKHQWNK
WKQAKVVQERETARARSQQAREEFKQLLMDMRAVGPHASYDDALPLFKHEPAYFAVRSER
ERQSVYDDVVKSKQRAALKTFDDRVHEIRSAFLDLIRAIPGFNVEWTWDKTMDYLEGVEH
FTANEMFKEDMLACLEAFEKEMERLDSEFHAKIREEKDSMQRKERKNRDAFVALLDELEE
HGQLHAETLWRTLYPDVCKDARYLALLGQPGSTALDLFKLRQEKLVDRLRRDRRTVRTLF
KEKGFEVTVNTTAEQYLEALQNEESTADISAVNMKFIFEYLLEKAEERERQAKREELRRN
KRALKEQLDALKSKFTKASPWSEVKPLVEEAAPDLLSTMGEEDHAHVYKKFVRKDPWRKD
AKEKGSKKENKDEDDKGSGSSSSSSSSSSSESDGDDDDKESRSSRRKSRGKHDSDEEDDH
HRSSRKKRSKKSKKKKRRHRHSDHDDDDDADDAAGVGDDKHHRRHRRHRRHTSRSRSRTP
TRSKR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagccatccaccacctttcgggtttccacctcgtggtgcaccaccacccatgatgtat
ggtggcccgcctccggggccgttcccaccaccacaggggccgccggggtacccaatgccg
ccaccgcctgggccgtatggtccaccgccagtgccacccgctggccatgcaccgccgcca
cacgcacaggccgacccttggcgcaaagccacagcaccggatggtcgtgagtactggtat
catgtggtgacaaacgagacacgctgggagcggccagaagcggcaaagccagccacgccc
tggcgcgagtacaagacaccggagggtcggccatactactacaacacagagacaaaggaa
actgtgtggcagaagccaaaggagcttgaggcggccgagtcaggaaaggcgccggcgccg
tcatcagcatcgactacaacaacaaccacgaaaactgctgctgctgctgttactgctgct
gctgctggtggtggtggtggtggtggtgagaagcagaagaaggaggagaaaggcagcaaa
tcgagcgagccgcgggagtatgcgacgaaggaggaggcggtggcggcgtttgttgagctg
ttggaggacaaggacgtcagcaccaactggaactgggacaaggtgagccgggtgattagt
ggggacgggcggtacatggcgctcaagcggatcagcgagaagaagcaccagtggaacaag
tggaagcaggcaaaggtcgtccaggaacgcgagacagcgcgtgcgcggtcgcagcaggcg
cgggaggagtttaagcagctgctcatggacatgcgggccgttggtccgcacgcatcatat
gacgacgccctcccgctcttcaagcacgagccggcgtactttgccgtccgatcagaacgc
gaacgacagagcgtgtacgatgatgtagtgaagtcaaagcagcgggcggcgctgaagacg
tttgatgaccgcgtgcacgagatcagatccgcatttctcgacctcattcgcgccatccca
ggattcaacgttgagtggacgtgggacaagacgatggactatctcgagggcgtcgagcac
ttcaccgcaaacgaaatgttcaaggaggacatgcttgcgtgcttggaggcgtttgagaag
gagatggagcgactggacagcgaattccacgcgaagatccgcgaagaaaaggactcaatg
cagcgcaaggagcgcaagaacagagacgcgtttgtggcgctgcttgatgagttggaggag
cacgggcagctgcacgcggagacgctatggcgtaccctctaccctgacgtctgcaaggat
gcacggtacctggcgctgttgggtcagcccgggagcacggcgctggatctgttcaaactc
cgacaggagaaactcgtcgaccgcctccgtcgcgaccgtcggaccgtcaggactctcttc
aaggagaagggatttgaggtgacggtcaacacaacggcagagcagtacctcgaggcactc
cagaatgaggagagcacggcggacatttctgcggtgaacatgaagttcatctttgagtat
ctgctcgaaaaggccgaagagcgcgagcgccaagcaaagagagaggagctgaggaggaac
aagcgtgcacttaaggaacaactcgacgccctcaagtccaagttcacgaaagcgtcaccg
tggtcggaggtgaagccgcttgttgaagaggcggcaccggacctgctgtccaccatgggt
gaggaggaccacgcacacgtgtacaagaagtttgtgcgcaaggacccgtggaggaaggat
gcaaaggagaagggatccaagaaggagaacaaggacgaagatgacaagggctcaggctct
tcctcctcctcatcgtcatcatcatcgtcggagagtgatggtgatgatgacgacaaggag
tccaggtcgagccggcgcaagtcgcgtggaaagcacgactctgatgaggaggacgaccac
caccgctcatcgcgcaagaagcgctcaaagaagtccaagaagaagaagcgacgtcaccgt
cacagcgaccacgacgatgacgacgatgctgacgatgctgctggtgttggcgatgacaaa
caccaccgccgccaccgccgccaccgccgccacacgtcccgctcgcggtcgcgcacccca
acacgctccaagcgctag
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