Salpingoeca rosetta: PTSG_10906
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Entry
PTSG_10906 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sre04990
]
PTSG_10906
Domain-containing proteins not elsewhere classified [BR:
sre04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
PTSG_10906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
eIF2A
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
WDR54
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_SCAP
Ge1_WD40
Beta-prop_ELP1_1st
PEP5_VPS11_N
Cytochrom_D1
DUF7165
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
16068816
NCBI-ProteinID:
XP_004988289
UniProt:
F2URC4
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MRYFESKARTVTFDSSKPNKEEEEDDELDLSDERRPRLEPAHGNKHSDADIKTQIQTAPT
APPTTTMSFEAKEVYLPNPRCERGKPFVLSADPKGKYFVYPHGKTIVVRDVEDPSKGYTY
SEHAAQTTVAKFAPSGFYVASADVTGKVRIWDTTQEEHALKYEYRPLAGRILDLAWTEDS
KRIVVCGESGERYAHAFLWDSGSSVGELIGHTKVANSIDVKPNRPYRVATASDDAHVGFY
AGPPFKLDHKSNNHSNFVNSVRFSPDGAFFVSAGADGKVFVYDGKTGELLSELKDGEKAH
ARGVYAVSWSADSKRFITASADMTVKMWNAESKELVTAFPFEDALDNQQLGCLWMGEHII
SVGLNGHIYFLDEANPATPKRVITGHNRAITALTAVPGSGEAYSASYDGKVCRYDLSSGL
ATELKQSFDNSVLAMAAADGVFVAASIADTAAVTPLGADALGNHFEVESTPNDVAHAAGV
TLIACLNEVVVRGNVTARLPVDYEPQACALSPDAKEAAVGGKDGKIRIYDVADAGLAEKK
VLDASGPVTALAYSPDAAHLASGDANRNVYVFDRSDFSLKMNRWRFHTAKINALAWSPNS
RLLASSSLDTNVIVWNMDKATKRIAIKGAHPQHDVTAVAWLDDTTVMSGGQDGALRTFAI
TPHQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattttgagagcaaggcaagaactgtcacatttgacagctccaagccaaacaag
gaagaagaggaagacgacgagctggatttgtcagacgaacgacgacctcgattggaacca
gcacacggaaacaagcactcagacgcagatatcaagactcagatacagacagcaccaaca
gcaccaccaacaacaaccatgtctttcgaagcaaaggaggtgtacctgcccaacccacgc
tgcgagcgcggcaagccctttgtgctcagtgccgatcccaagggcaagtactttgtctac
cctcacggcaaaaccatcgtcgtccgcgatgtcgaggacccatccaagggctacacgtac
agcgagcacgctgcgcagaccaccgtggccaagtttgccccatccggtttctacgtcgcc
tccgcagatgtgacgggcaaggttcgcatctgggacacgacgcaggaggagcacgcgctc
aagtacgagtaccgcccgctcgcaggccgcatcctcgaccttgcgtggacagaggacagc
aagcgcattgtcgtgtgcggcgagagcggcgagcgctacgcacacgcctttctctgggac
agcggctcatctgttggagagctgattggccacacaaaggtcgcaaactccatcgacgtc
aagcccaaccggccgtaccgcgtggcgacagcctctgacgatgcgcacgtcggattctac
gccggcccgcccttcaagctcgaccacaagtcaaacaaccactccaactttgtcaactct
gtgcgcttttcccccgacggcgccttcttcgtctccgccggcgcagacggcaaggtgttt
gtgtacgacggcaagacgggcgagcttctctccgagctcaaggacggcgaaaaggcgcac
gcgcgcggcgtgtatgctgtgagctggtccgccgactcgaagcgcttcatcaccgcatcc
gccgacatgaccgtcaagatgtggaatgcggagagcaaggagcttgtgacggcgttcccc
tttgaggacgcgctcgacaaccagcagctcggctgcctctggatgggcgagcacatcatc
tctgttggcctcaacggccacatctacttcctcgacgaagcaaaccccgccaccccaaag
cgcgtcatcacgggccacaaccgcgccatcactgcgctcactgccgtgcctggatctggc
gaggcgtacagcgcttcctatgatggcaaggtgtgccggtacgacctgtcgagcgggctt
gcgacggagctgaagcagtcgtttgacaactctgtgctcgccatggcggctgctgacggc
gtgtttgtggccgcctccatcgccgacaccgcagccgtcaccccgctcggcgcagacgcc
ctcggtaaccactttgaggtggagagcacgcccaacgacgtggcgcacgccgccggtgtt
accctcatcgcctgcctcaacgaggtggttgtgcgcggtaacgtgacagcccgcctgccg
gtcgactacgagccacaggcgtgtgcgctgtcgccagatgcgaaggaggccgctgtcggc
gggaaggacggcaagatccgcatttacgacgtggcagacgccggccttgccgagaagaag
gtgcttgatgcctctggccccgtcaccgccctcgcctactccccagacgcagcacacctc
gcttccggtgatgcgaaccgcaacgtgtacgtctttgatcgcagcgacttctccctcaaa
atgaaccggtggcgcttccacacggcgaagatcaacgcgctcgcctggagccccaactcc
cgcctcctcgcaagctcgtcgcttgacacgaacgtgattgtgtggaacatggacaaggca
acaaagcgcattgccatcaagggcgcgcacccgcagcacgacgtcaccgcggtcgcctgg
cttgacgacacgactgtgatgagcggtggccaggacggcgccctgcgcacctttgccatc
accccgcaccagtga
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