Salpingoeca rosetta: PTSG_10922
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Entry
PTSG_10922 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K19360
nephrocystin-3
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sre03037
]
PTSG_10922
Cilium and associated proteins [BR:
sre03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
PTSG_10922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_2
TPR_8
TPR_1
DUF4062
TPR_MalT
TPR_16
AAA_16
NPHP3
TPR_19
AAA_22
TPR_7
TPR_14
NPHP3_N
RPN7
KAP_NTPase
NPHP3_hel
ATPase_2
NACHT
nSTAND1
TPR_Sec16
T2SSF
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
16068835
NCBI-ProteinID:
XP_004988308
UniProt:
F2URE3
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAQRENANNPFAVTAAAAEGGDGDGDGGGEGIDGLADVFHVAFDPFAAALDLHAKQDAAE
RSSQPSTSATTEATTPTTSASTSSSHASYTADGNWSWAQQHFASGSRVIRAFFSSPFGGM
EDERTTLTKLYFPELRAMCEAEGLTFVPIDLRWGITERDAQDARVLQLCLKEIDRCDMFV
GFYAARYGWHNTGSDELLTRNFDIAIKEYPWIEAFKDKSVTEIEFEAGHFQCPGEKASCF
FFRASEHDSAKHAALTAAGDTTNARKFSAESAQAAAMRDELKKRVVASASTLRLPCHAYS
TPEEGARLMYETVKSILAPRVTLARQANRLKHGDSEAAQHDVYMKLRSDMFLGYENYLDA
ITQYVNSESTTPLVVTGRHGTGKTSLLARWLRSHMEGARKDNVTQSSSKDSKGGPTPSSA
SGDLLFVYHFVGCSSKSTTLVNLLQRLVQQFSSLIGDDVDAFEFDITQLKSKLASFMARA
ARAHSDRRIVVLLDALDELLAEHNAHDLSWLPSLLPSNVAVIVSTVDASLAREHQWSNLH
ITDLSPDLISRIMHIQLQIRGKSLSERQQARILDHPACHTPLFLIVLIAELCAFGSFEEL
DDKIEACLRSENVEALFMHVLQRLDDDFVGVLAGNGDGAVRAVMTHLACARHGLSEAEIM
DCLELTPQTWSRLYFAMEDLLVTRSGLLLRACITHPRLFADLCAGLSAGNYDLLHYWAAV
GDTGEQMADAYMKSLDAQLSAAENDDDLTEIATAATRIGQYLAEAGHFKHAVKPFQQALK
LKERVYGRESEKVVDTLADLGRLCFTQGDAKSSHALYTRALKIARKCFDADDLSVINIEI
GYASVLKQQEDFDAALQLYKHALKVYSSVLSPEHLDVALVHHNIGDVLARTGHEEEAVES
YQIARDIRQRALGASHPATVSTLVGLGSVLLATGQVEEAQACFKTALEVRTRVLGRNHPE
TAEALGKAALIEALTGTIDDAMNMFMEAITILEESFGPNHPALCEYLDRMAELAQEGGHA
EDALHFYTRSLSIKEVALGSDSPALCDTLYNIAQLSMEANHLQEAYVNIKRVYDIAKVSF
GPEHPLTQEAGEKTQLLSQLV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacgcgaaaacgcaaacaacccgtttgctgtcactgccgctgctgctgaaggc
ggcgatggcgatggcgatggtggtggtgaagggattgatgggctggcagacgtgtttcac
gtggcgtttgatccctttgcggcagccctggacctccatgcgaaacaggacgcggctgag
agatcatcgcagccatcgacgtccgccacaacggaggccaccacgccaacaacctctgcc
agcaccagcagctcgcacgcatcatacacggccgatggcaactggtcttgggcgcagcag
catttcgcctctggatctcgcgtgattcgcgccttcttctcgtctccatttggcggtatg
gaggatgagcgcacaacgctgacaaagctgtacttccccgagctccgcgccatgtgcgaa
gccgagggcctcacctttgtccccatcgatcttcgctggggcattacggagagggatgca
caggatgcgcgtgtgctgcagctgtgcctcaaggagattgaccgatgtgacatgttcgtt
ggattctatgcagcgcggtatgggtggcacaacacggggagtgatgagctccttacgcgc
aatttcgacattgcgatcaaggagtacccgtggatcgaagcgttcaaggacaagagcgta
acggagattgagtttgaggccggacactttcaatgccctggggagaaggcgagctgcttc
ttcttccgtgcgagcgaacacgatagcgccaagcacgccgccctcacagctgccggcgac
accacaaatgcgcgcaagttttctgctgagtcagcacaagctgctgcgatgcgcgacgag
ctgaagaagcgggtggtggcgtccgcgtccaccctgcgcctgccctgtcacgcgtacagc
acgccagaggagggggcgcgcttgatgtacgaaacagtcaagtcgattctcgcaccacgc
gtcaccctcgctcgccaggcaaacaggctcaagcacggtgattctgaagcggcgcagcac
gacgtgtacatgaagttgcggtcagacatgtttctcgggtacgaaaactacctggacgcc
attacgcaatacgtcaattcagaaagcacgaccccgcttgtggtgacgggtcgacacgga
acaggaaagacgtcgctgctcgcgcgctggctccgatcgcacatggagggcgcccgcaag
gacaacgtgacgcaatcctcctcgaaggatagcaagggaggaccgactccttccagtgcg
agtggcgatttgctgtttgtgtaccatttcgtcggctgttcgagcaagagcacgacgctc
gtcaacctgctgcagcggctcgtgcagcagttcagttctctcattggtgatgacgtggac
gcgtttgaattcgacatcacgcaactcaagtcaaagctcgcatcgttcatggcacgagct
gctcgcgctcacagcgatcgacgtattgttgttcttctcgacgcattggacgaactgctg
gcggagcacaatgcacacgacttgtcgtggttgccgtccttgctcccaagcaacgtcgca
gtaattgtgtcgactgttgacgcgtcgctggcccgtgagcaccagtggtcgaacctgcac
atcaccgatctctcaccagacctcatctcacgcatcatgcacatccagctgcagatcagg
ggcaagagtctatctgagaggcagcaggcgcgcatcctggaccacccagcgtgccacacc
cccctcttcctcatcgttctcatcgctgaactctgcgcgttcggcagctttgaggaactc
gacgacaaaattgaggcctgtctcaggtcggagaatgtggaagcgctcttcatgcacgtc
ctccaacgcctcgacgacgactttgtcggcgtgcttgcaggcaatggcgatggcgctgtg
cgtgctgtgatgacgcatctcgcatgtgcgcgacacgggttgtcagaagccgagattatg
gattgcctggagctgacgccccagacatggtcacgcctctattttgcaatggaggacctg
ctcgtcacgcgttcgggcctgctgttgcgagcctgcatcacgcaccctcgcctgtttgct
gatctgtgcgctggtctgagtgccggcaattacgaccttctccattactgggccgctgtt
ggcgacacgggcgaacagatggcggatgcgtacatgaagagtttggacgcgcagctgtcg
gcggcagagaacgacgacgacctcacggagattgcgactgctgcaacgcgcattggccaa
tatctggcggaggcggggcacttcaagcacgccgtcaagcctttccagcaagcgttgaaa
ttgaaggaacgcgtgtacgggcgggagagcgagaaagtcgtcgacacattggcggatttg
ggccggctctgcttcacacagggcgatgcgaagagcagccatgcgctgtacacgcgcgcg
ctgaagattgcgcgaaagtgttttgatgcggacgatttgtccgtcatcaacattgagatt
ggatatgcgtccgtgttgaaacagcaggaggactttgatgccgctcttcagctctacaaa
cacgctctcaaggtgtattcatccgtgctgtcacccgaacaccttgacgtggcacttgtg
caccacaacattggagatgtgcttgcacgcacggggcacgaggaggaggccgttgagtcg
tatcagattgctcgtgacatccgacagcgcgctctcggtgcgagccatcctgcgacagtg
tcaacgcttgttggtctcggatctgttctgcttgcgacgggacaggttgaggaggcgcag
gcgtgcttcaagactgcgctggaggtgcgtacgcgggtgctgggacgaaatcatccagag
acggccgaggcgttgggcaaagcagccctgattgaagctcttaccggcaccattgacgac
gcaatgaacatgttcatggaagcgatcaccatcttggaggagtcgtttggcccaaatcac
ccggcgctgtgcgaatatctcgacagaatggcagagctcgcacaggagggcggacatgct
gaagacgcattgcatttctacacgcgatcgctgtccatcaaggaagtggcgctcgggtcc
gattcgcccgcgctttgcgacactctgtacaacattgcgcaactcagcatggaggcgaac
cacctgcaagaggcgtatgtgaacatcaagcgcgtgtacgacattgcgaaagtttcgttt
ggacccgagcacccgttgacacaggaggccggagagaagacgcagctcctctcccaactc
gtctga
DBGET
integrated database retrieval system
