Salpingoeca rosetta: PTSG_11032
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Entry
PTSG_11032 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K12880
THO complex subunit 3
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_11032
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_11032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_11032
03041 Spliceosome [BR:
sre03041
]
PTSG_11032
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PTSG_11032
Spliceosome [BR:
sre03041
]
Complex C
Other components
EJC/TREX
PTSG_11032
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PTSG_11032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_SCAP
Tricorn_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
RMC1_N
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
PQQ_2
Lactonase
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
16068483
NCBI-ProteinID:
XP_004987956
UniProt:
F2USH8
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MMSSVRAGDGSRSDYAAILKRPSFSEFSHHKEAVLCLDWDCEGGMLGSGSMDKTACVMRL
TDRLTRELELRGHSGSVDFLTWHPNNKSVLATASSDHHVKFWDVRTGPKCTSTVPTKRPS
ICVRYAPDGNTLAVVNLEDTLMLIDAKTGKVTKSRQFNYEVNEFTWDKSGKHLFLTNRQG
RVEVYTFPELEPTDVAITAHTASCTCINFDPTHRDIRKADSVALLGAL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagcgttcgtgctggcgatggcagtcgcagtgactatgcggcgatcctgaaa
cggccctccttctcggagttcagccatcacaaagaagcggtgctgtgcttggactgggac
tgcgaaggaggaatgcttggatccggatccatggacaagactgcttgtgtgatgcgattg
acagaccgcctgacgagggaattggaattgcggggacatagcgggtcagtggacttcctc
acgtggcaccccaacaacaagtccgtactggcaacggcgtcaagtgaccaccacgtcaaa
ttttgggacgtacgcacgggtcccaaatgcacttcgaccgtcccaacaaagcggcccagc
atctgcgtccgctatgcacccgatggcaacacgctcgcagtcgtcaacttggaggatacg
ctcatgctgattgacgccaagacgggaaaagtgacgaagagcaggcagttcaactacgag
gtgaacgagttcacgtgggacaagagcggaaagcatctcttcctcaccaacagacaagga
cgcgttgaggtgtacacgttcccagagctggagccaactgacgttgccatcacggcgcac
accgcatcgtgcacatgcatcaactttgatccaacacacagggacattcgcaaagctgat
tccgttgcactcttgggcgcactgtag
DBGET
integrated database retrieval system