KEGG   Salpingoeca rosetta: PTSG_11076
Entry
PTSG_11076        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K17908  autophagy-related protein 18
Organism
sre  Salpingoeca rosetta
Pathway
sre04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    PTSG_11076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sre04131]
    PTSG_11076
   03029 Mitochondrial biogenesis [BR:sre03029]
    PTSG_11076
Membrane trafficking [BR:sre04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    PTSG_11076
Mitochondrial biogenesis [BR:sre03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    PTSG_11076
SSDB
Motif
Pfam: PROPPIN BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_VPS8 CNH Beta-prop_Aladin CFAP251_N Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_IFT140_2nd Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N DUF5711 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 16068522
NCBI-ProteinID: XP_004987995
UniProt: F2US26
LinkDB
Position
Unknown
AA seq 444 aa
MFRSSTHDINCGFFNQDASRLAVGTMDGYMIMKISPDIKMITSSHEESTSLIHLYYNTGL
IAHVGGGSEAFSSQRCMKITNVRTRKEIIRMSYSKKILAVRINRRFLVLASDESIRIYDM
GTMKLKHTISSPPANPNGVLALATCHVLKEEDKGCRHLLCYPKSNEKGDLFVYDVENQRL
LYNLEAHTSPVACVAFNNRGSLLATASEKGTKFRVFATATRAKLYELRRGYATRARVLSM
NFCPESKYLCVSSEKATVHVFKTDHHDQEAVAPPEAPEESDSWSSYFTSGLSSAVSYFAP
SLPEMWTEERSFAMATLDEACENTSALVYEDRRLVLIVFTSTGDLYKFWVHEDGTVTPKQ
RVSVLSIEREYAQGVHTASTSQDGEESDDMAHATAGMRQLLAGEGDEESAPPPQHQQQHQ
QQARGDEAQASARKELASDEQDHQ
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgttccgctcatcgacgcatgacatcaactgcggcttcttcaaccaagacgccagtcgg
ttggctgtcggcacgatggacgggtacatgatcatgaagatctctccggacatcaagatg
atcacgtcctcgcacgaggagagcacgagcctgattcacctgtactacaacacgggcctg
attgcgcacgttggcggaggctctgaggccttctcgtcgcaacggtgcatgaagatcaca
aacgtgcggacgcgcaaggagattatccgcatgtcgtacagcaagaagatcttggccgtg
cgcatcaatcggcggttcctcgttctcgcctcggacgagagcatccgcatctacgacatg
ggcaccatgaagctcaagcacaccatctcatctccgcccgccaacccaaatggtgtcctt
gccttggccacgtgtcacgtgctcaaggaagaagacaagggctgccgccaccttctctgc
tacccgaaatccaatgagaagggcgatcttttcgtctacgacgtcgagaaccagcgtctg
ctgtacaatctggaggcacacacgtcgcccgtggcgtgtgtcgccttcaacaacagggga
tccctcctcgccaccgccagcgagaagggcaccaagttccgtgtgtttgccacagcaaca
cgtgcaaagctgtatgagcttcgtcgcggctacgccacccgcgcccgcgtcctctccatg
aacttttgcccggagtccaagtacctgtgcgtgtcgagcgagaaggcgacggtgcacgtg
ttcaagacggaccaccacgaccaagaggcggtcgccccacccgaagcgcccgaggagagc
gactcgtggtcctcctacttcacatcgggcctgtcctccgccgtgtcctactttgccccg
agtctgcccgagatgtggacggaggagcgaagctttgccatggccacgctcgacgaagcg
tgcgagaacactagcgccctcgtgtacgaagacaggcgcctcgtcctcatcgtcttcacc
tcaacaggcgacctctacaagttctgggtacacgaggacggcactgtgacgccgaagcag
cgcgtgtctgtgctgagcatcgagcgggagtacgcgcagggggtgcacaccgcgtccacg
tcccaggacggcgaggaaagcgatgacatggcgcacgcaacagcaggcatgcggcagctg
ctggcaggggagggcgacgaagagtcggcaccgccaccgcagcaccagcagcagcaccag
cagcaggcgcgtggcgatgaggcgcaggcgagcgcacgcaaggagctggccagtgatgaa
caggaccaccagtga

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