Salpingoeca rosetta: PTSG_11090
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Entry
PTSG_11090 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14312
nuclear pore complex protein Nup155
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_11090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_11090
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_11090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
DUF1840
Motif
Other DBs
NCBI-GeneID:
16068536
NCBI-ProteinID:
XP_004988009
UniProt:
F2US40
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MDVTLDNGDPEYAGLQKAKELVDGFQDVDDKYPTISQLNMEGEDAELYVNETDVPPQRHQ
FGLDTEIEQQLQQVQVHSMQGIFSDIQRAWMTVDSQLYMWHYSGKDFCCYQELEEVIVGV
GLVRPKPGVYDASIEHLLVLATPLMVYLIGVDMRMDESDVGEVHLNPAVLHTTATDNVCF
TCIVGTPDGRIFMGGDDAAIYEIQYERDDGWLRRKCRKVNHTRNLLSFLMPTIVTQTWGV
RAEPIRQLVLDPTGTTLFARSDNTITAYRVHGGSLSRACAMYDERGRADPYRPGLHGAII
TIAPIADNQIVAVTDKGLSDALRTERYQNKLITQHMPPTQFVLLTSAGTFYIEDRRPVDT
LAYHFEHGHASGAARFFQPAFPESVLQGLPPFQVSIKQQAFVREASAAALVLACNPPPGV
SAGQAVEALRHHGGAPFHLNRPAVFQQHSFVGQPEQEPDLVLSGRHDAVFQLIGRVARTF
HWKRPLLGAASAAASIGDPAVLSSSLALMDGLQRVLVAVYDKVEPIAAPIGGKLAPRDEE
RASIYTASVLITYVQQALRLWAILTQEPDVFTTLAGDLSSQERAMLESISFWDLATTREG
NRLARTLIEKMLMRLVRANESDTFSRRTKELHDACPLFHSSRAMLESKAKEQLVRAEQVL
ATPGMDAAAARKEASRYLTGVVRDYQRIFKDDNTTRGLADICTRLLKLEHWEGITRLVLT
CAELERLEPAVTYYRRGEPPEDIEGMRANEERELCYEQLRTMLTELLGRALQTGPAQQQY
ERDLHAQIAVLNSPFLEDWLQRVEDKYSDDPKALREILSLKFDYFREKRNAKRLAETACQ
LARLSLESQSRYMQGADAMGTAQHVAQLLRTLRDMKRAAYHQEQVIRALDAAKDAAAIHQ
QEANAAIVQLNSRLWPLDDLLRRFSEPFRLYECQLAQRLAQGRITPKEHSQIWHNIVQQT
WQHASRIPGRDTLEVVEEVMTRLAEIMKPLRDDDTEAPSLIAVWMEQYLAENGTDTMVVV
DKLHKIAGYDWSFLFNLYCKLDVEQQQQFMLKANRPLHLVRVLAGILKCWKREATRSERL
SLHQALSITLPELIAKAAAEGDNGLKSDLAQLQL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgacgctcgacaacggagacccagagtatgcgggtctgcaaaaggccaaggag
ctggtcgacggcttccaggatgtcgatgacaagtacccgaccatcagccagctgaacatg
gaaggggaagacgccgagctgtatgtcaacgagacagacgttccaccacagcggcaccag
tttggcctggacacggagattgagcagcagctgcaacaggtgcaagtccacagcatgcag
ggcatcttcagtgatattcaacgcgcgtggatgaccgtcgactcgcagctctacatgtgg
cactactccggtaaggacttttgctgctaccaggagctggaggaggtcatcgtcggcgtc
ggcctcgtccgcccaaagccaggcgtgtacgacgcgagcattgagcacctgcttgtgctg
gcaacgccgctgatggtgtatctgattggcgtggacatgcgcatggacgagagcgacgtt
ggggaggtgcacctcaacccggccgtgctgcacacaacagcgacagacaacgtctgcttc
acgtgcattgtcggcacgcccgacggtcgcatcttcatgggcggcgacgacgcggccatc
tacgaaatccaatacgagcgggatgacgggtggctgcggcgcaagtgtcggaaggtgaac
cacacccgcaacctgctgtcgttcctgatgccgacgattgtgacgcagacgtggggggtg
cgcgccgaacccatcaggcagctggttctcgatcccacggggacaaccctctttgcccgc
tcagacaacaccatcacggcgtaccgggtgcacggcgggtcgctgtcgcgcgcgtgtgca
atgtatgacgagcgcgggcgggcagacccgtaccgcccaggcctccacggcgccatcatc
accattgccccaattgcagacaaccagattgtcgccgtcacagacaagggtttgagcgat
gcgctgcgcacggagcggtaccagaacaagctcatcacccagcacatgccaccgacgcag
tttgtgctgttgacatctgcgggcacgttttacattgaggaccgtaggcccgtggacacg
ctggcgtatcactttgagcacggccatgcctcgggcgctgcacgctttttccagccggcc
ttcccagagtcggtgctccaggggctgccacccttccaagtcagcatcaagcagcaggcg
tttgtgcgcgaagcgtcggctgccgcgctcgtgcttgcatgcaacccaccgccaggtgtg
tccgctgggcaggctgttgaggcgctgcggcaccacggaggcgctccgttccacctcaac
aggcccgccgtcttccagcagcacagcttcgtcggccagccagagcaggagcccgatctt
gtgctctctgggcggcacgatgcggtgttccagctcattggccgcgttgcccgcacgttc
cactggaagcgcccgctgctcggtgctgccagtgccgccgcctccattggcgacccggcc
gtcctctcctcctccctcgccctcatggatggcctccagcgcgtgcttgttgccgtgtac
gacaaggttgagcccatcgccgcacccattggcggcaagctcgccccgcgcgatgaggag
cgtgcgtccatctacaccgcgagcgtgctcatcacgtacgtgcagcaggcgctgcggctg
tgggcgattctcacgcaggagccggacgtgttcaccacgctcgcaggcgatctctcgtcg
caggagcgcgccatgcttgagagcatctccttctgggacctggccaccacgcgcgagggc
aacaggctggcccgcacgctcattgagaagatgctcatgcgcctggtgcgcgcaaatgag
tctgacacgttttcccgccgcacgaaggagctgcatgacgcgtgcccgctcttccactcg
tcccgcgccatgctcgagtcaaaggccaaagagcagctggtgcgtgctgagcaagtgctg
gccacgcccggcatggacgcagcggccgcccgcaaggaggcgtcccgatatttgacgggt
gtcgttcgtgattatcagcgcatcttcaaggacgacaacacaacacgcggccttgctgac
atctgcacccgtctcctcaagcttgagcactgggaaggcattacccggcttgtgctgacg
tgtgccgagctggagcggcttgagcccgcagtgacgtactaccgccgcggcgagccccca
gaggacattgagggcatgcgcgcaaacgaggagcgcgaactctgctacgaacagctgcgc
acgatgctgacggagctgcttggccgcgcgcttcagacgggcccggcccaacagcagtac
gaacgcgacctccacgcccaaattgccgtcttgaattcgccgttccttgaggactggctg
cagcgcgtggaggacaaatattccgatgatccaaaggccctgcgcgagattttgagcctc
aagtttgactatttccgggagaagcgcaatgcaaagcggttggccgagacagcgtgccag
ctcgcccgcctctccctggagagccagagccggtacatgcagggggcagatgcgatgggg
acggcgcagcacgttgcgcagctgctgcgaacgctgcgggacatgaagcgtgcggcgtac
caccaggagcaggtcatccgcgccctcgacgccgcaaaggacgccgcagccatccaccag
caggaggcaaatgccgccattgtgcagctgaacagcagattgtggccgcttgatgacttg
ctgcgtcggttctcggagccgttccggctgtacgagtgccagcttgcccagcgtctcgca
caggggcgcatcacgccaaaggagcactcgcagatctggcacaacattgtgcagcagacg
tggcagcacgccagccgcatccccgggcgcgacacgctggaggtggtggaggaggtgatg
acccgcctggccgagattatgaagcccctcagggacgacgacacagaggctccaagcttg
attgcggtgtggatggagcagtacctggccgagaacgggacagacaccatggtggttgtc
gacaaactgcacaagattgccggctacgactggtccttcctcttcaacctctactgcaag
ctcgacgtcgagcagcagcagcagttcatgctgaaggcgaaccgcccgctgcatcttgtg
cgtgtgttggcggggattctcaagtgctggaagcgcgaggcaacgcgcagcgaacggctg
tcactgcaccaggcgctgagcatcacgctgccggagctgattgcaaaagcggcggcggag
ggcgacaacggcctcaagtcagacctcgcacaactccagctctga
DBGET
integrated database retrieval system
