Salpingoeca rosetta: PTSG_11540 Help Entry PTSG_11540        CDS       T04136                                  Name (RefSeq) uncharacterized protein   KO K20184   vacuolar protein sorting-associated protein 41 Organism sre  Salpingoeca rosetta Pathway sre04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sre00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     PTSG_11540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sre04131]     PTSG_11540 Membrane trafficking [BR:sre04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     PTSG_11540 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_Vps41 TPR_Vps41 Clathrin Beta-prop_HPS5 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_CDC20-Fz WD40 zf-RING_5 WD40_Prp19 ANAPC4_WD40 WDR55 NBCH_WD40 zf_RING_Vps8 Beta-prop_WDR19_2nd DUF2972 RING_XB3-XBAT31 zf-C3HC4 zf-C3HC4_2 PEP5_VPS11_N DNA_pol_phi zf-RING_UBOX IBR Motif Other DBs NCBI-GeneID:  16067614 NCBI-ProteinID:  XP_004998644 UniProt:  F2TVH6 LinkDB All DBs Position Unknown AA seq 966 aa AA seqDB search MLLEVEAGEVVTMTERREMMVDEEDGADATPLRALDSGDGDSDEDSGEGSSGDSDDSDDG EEEETEEDDEGEEDDSDDDEDDDDEDDDDDDDDDDDDEEEEEEEEELPRLTFYKLGADVP TILNDRVATCFAVSSKFAILGTDLGSIHILDAMNGTEVQRYTQHSERVTDISIDRYGDFV ATGADDGKVIIRNLYDAKAVLSFSFDRPIRSVAIDPEYPKKKKNMFITGGKAGQLLLHVD KSFAFFSRTNATVLHSGEGCVSIVRWRGPYVAWANDIGVKLYDTTLNQRIASVDRPQNSP SAEEYQCRLSWKDDKTLLMGWADHIAVGEIRQRAEPAGPGEPNVFMQLLVRIETSFWISG IAPFSAEEMALLAYLDSEVELESGQKALCGDVPELKILTMAALEVSSSDLAVEDYDKFRA NDYFFESIPDENVYFIVSPRNIIVGKPLSMDERIEWLIKHDRHEDAVNVADENHALLTAY TPTKVREAWLQSLLEKGMFDHAAALTQPTFNTDVLLWEKWIAIFRKFGALNNLAKYIPRD EPRLKESTYTGVLLTYLDTDLTLFNAILTKWVAVIKIDEIVQAVENKNLKNPSNQLRNIL AFLYARTNQKDKSLNIYLDLGRTEAFDLLNQKPLLFQHVKDRVVDMIRLDQERAIALLTE NVDQMPVSSVLPQLEHEPVLQLQYLEAMAMKDEAVARKFGHRLVLLTADHARHKLLRLLQ TNHAIPYREALKICQEKKLWREYAYCLQRGGKVKEAMVLMITQLGLVEEAIELVAQENDE TLWDDLIDQCFASENPEHIRLLLANSGSYINPLKIIQRPDLRGRVIDGLRDSLVKILSDF NLQIDLLKGSTAIMMNDCVDLTMKLHRLRKRAIVTEPAKAHCHNCSRALASFSGTRDEAL LFRCKHMFCRTCLQEFVAGRQRSRSMHSNAPQQPIELNFCPICTRSARRPRGGGRGAVGA TRPIRR NT seq 2901 nt NT seq  +upstreamnt  +downstreamnt atgttgttggaggtggaagcaggagaagttgtgacgatgacagagcgacgtgagatgatg gttgacgaggaagatggcgcggatgcaacccctcttcgagctctggatagcggtgatggg gacagcgacgaagactccggcgaaggcagctctggagactctgacgactcagatgacggc gaagaagaagagacagaggaagacgacgaaggcgaagaggatgacagcgatgacgacgaa gacgacgacgacgaagatgatgatgatgatgatgacgatgatgacgatgatgaggaagag gaagaggaggaagaggagcttcccaggctcactttctacaagcttggtgctgatgtgcca accatcctcaatgatcgcgtggcgacatgctttgccgtgtcctcaaagtttgctattctg gggacagacctcggctctattcacatcctggacgcaatgaacgggacagaagtgcaacgg tacactcagcactcggaacgcgtgaccgacatctccatcgaccgatacggcgactttgtt gcaaccggtgctgacgacggcaaggtcatcatccgcaacttgtacgacgccaaagccgtt ctctccttttccttcgaccgccccattcgctctgtggcaattgatccagagtacccaaag aagaagaaaaacatgttcatcactggtggcaaggccggacagctgctgttgcatgtcgac aagtcatttgcattcttttctcgcacaaacgccactgtgctgcacagcggagaagggtgc gtgtcgattgttcgctggcgcgggccttatgtcgcctgggcaaacgacattggcgtgaag ctctatgacaccacgctgaatcagcgcattgcgtccgttgaccgcccacagaacagccca tctgctgaagagtatcagtgccggctgtcgtggaaggatgacaagacgcttctcatgggc tgggcggaccacattgccgttggagaaattcgccagcgggccgagccagccgggcctggc gaaccaaatgtgttcatgcagctgctggtgcggattgagacgtcgttttggatcagcgga attgcgcccttcagtgctgaggaaatggcgctactggcgtatcttgactctgaggttgag cttgagtctggacagaaggcgctgtgtggagatgtgcccgagctgaagatcctcacgatg gccgcgcttgaagtgagcagcagcgatcttgctgtcgaggattacgacaagttcagggcg aacgactacttcttcgagagcatcccggacgagaatgtgtactttattgtgtcgccgcgc aacattatcgtcggcaagccgctgtcgatggacgagcgcattgagtggttgatcaaacac gatcgacacgaagatgccgtcaacgtcgccgacgagaaccacgcgctcctcaccgcatac acgcccacgaaagtgcgggaggcgtggctgcagtcgctgctggagaagggcatgttcgac cacgccgcagcgttgacacagccgacattcaacacggatgtgctgctgtgggagaagtgg attgcgatattccgcaagtttggggccctcaacaaccttgccaagtacattccacgcgac gagccacgattgaaggaatcaacatacacgggtgtattgctgacatacctcgacacagat ctcacgctgttcaacgccatcctgacgaaatgggtggccgtcatcaaaattgacgagatt gtgcaggctgtcgagaacaagaacttgaagaacccatccaatcagctccgaaacatcctc gcattcctgtatgcgcgcacgaaccagaaggacaagagcttgaacatttatctcgacctc ggccgcacggaggcatttgatctcctcaaccagaagcccctcctcttccagcacgtcaag gaccgtgtggttgacatgatccgccttgaccaagagcgcgccatcgcgctcctcacagag aatgtcgaccagatgcccgtctccagcgtgctgccccagctcgaacatgagcccgtgctg cagctgcagtacttggaggcaatggcgatgaaagacgaggcggttgcgcgcaagtttggg caccgccttgtcctcctcactgcggatcacgcacggcacaagctgctgcggctgctgcag accaaccacgccatcccctaccgcgaggcgctcaaaatctgccaggagaagaagctgtgg cgtgaatacgcgtactgcctccagcgcggcgggaaagtcaaggaggcaatggtgctgatg atcacacagcttggcctcgtggaagaggcgattgagttggtggcgcaggaaaacgacgag acgctgtgggatgatttgattgaccagtgctttgccagcgaaaacccggagcacatccgc cttctcctcgccaactcgggctcctacatcaacccgctcaagatcatccagcgcccggat cttcgtggccgcgtcatcgacgggctcagggattcgctcgtcaagatcctctcagacttt aacctccagattgatctgctcaagggctcgacagccatcatgatgaacgactgtgtggac ctcaccatgaaactccacaggctgcgcaaacgcgccattgttacagagccagcaaaggcg cactgccacaactgtagcagagccctcgcctcattcagcgggaccagagacgaagccctg ctattccgatgcaaacacatgttctgccgcacatgtttgcaagagtttgttgccggtcgc cagcggtctcgctccatgcattccaacgctccgcagcagccgattgagctgaatttctgc ccaatttgtactcggagcgcacggcgtccacgcggcggcggtcgcggtgctgttggcgca acccggcccatcaggcgatag

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