Salpingoeca rosetta: PTSG_11587
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Entry
PTSG_11587 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14309
nuclear pore complex protein Nup93
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_11587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_11587
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_11587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_12
Nucleopor_Nup85
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
16067450
NCBI-ProteinID:
XP_004999014
UniProt:
F2TWJ9
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MDLLLSKSKELARRTRDGVQRRVDVNDPVRLLAVAQAHARPAHHQDKTMHTLNAQRLLGD
QMDVDNYLHLKNVKLMTAAEPFISSQPASVEEFLKAERQNALISAVTSAQEAAVRDFHQQ
HFDHLQHEWEHTEKAEIRKILGVELDVTSSSLAQKDQSNVFQDVIEDFVGHIIDNTAPYP
IVERLKEAATTLYSQDQRAFVDCLEIVQSMLRPPEGPLHAAHYAKLRTTRDGRQQYVQQM
RRSAITKLQERYRAKLAGADLESFARAKRTQHLLHDMTRDDEQWAVLFYALRMGLREEAL
HTNLCQQDADLHEAVASAFAFQQPSFLRTADGRSLYERGVLALLSGSPDNFPRELQQENL
EDYLWFKLRSLPENDVAQYTEFQKLISKSYGESHFQAARNPWNYLFALLFTAQFERAVEF
LQRVDLELAVHLAIPLHHYGALDATEDISENTLVEQPGEVACLYNFGLLVQRYARLIMRQ
SPATALNYLYLVRSMKLSSAADSPSVFVVNFADVILENNDLALLGGYDTSMRQVLGGDLV
RFMPDISARHRFLRDLAIEFRSRGKFPEAIRLFQEAQEDDEATNLLIEKLTEVIILDDHD
DIAWSQYLERSRFVPADAPRRADIDVLENVVQFIYACHRETTTDPLFFWQELNRMQVFPL
HPDEVDTCMRKIQSLGKEVSAVFPSLIFYAMRLTEHKLRAHQQRVSGHFDVPEEAKNWQQ
RGRALLTFAVEMGHTFGAEKAQVLERLQLLVESVETSMRVFAGHP
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctgttgagcaagtcgaaggagcttgcacgacgcacgcgcgatggcgtgcag
cgacgcgtggatgtgaacgaccccgtgcgcctgctggctgttgcccaggcgcacgctcgc
cccgcccaccaccaagacaaaaccatgcacaccctcaacgcgcaacggttgcttggggac
caaatggatgtggacaactacctccacctgaagaacgtcaagctcatgacagctgccgag
cctttcatctcctctcaaccagcctctgtcgaggagtttctcaaggctgagcgccagaat
gccctcatctccgcagttaccagtgcacaggaagcggctgttcgtgactttcaccagcaa
cactttgaccatctccaacacgagtgggagcacacggagaaggccgagatccgcaaaatc
ctcggtgtcgaactggacgtcacttcaagctccctcgcccagaaggatcagtccaatgtg
ttccaggacgtcattgaagactttgtcggtcacatcatcgacaacactgcaccgtatccg
attgtggagcgactgaaggaggccgccacgaccctctactcccaggaccagcgggcgttt
gtggactgccttgagattgtgcagtcgatgctccgtccgcccgagggcccgctccacgcc
gcacactacgccaagctgcgtacgacacgtgacgggcggcagcagtatgtgcagcagatg
cggcgcagcgccatcacgaaactgcaggagcgataccgggccaagctcgccggcgccgac
ctggagtcgtttgcgcgggccaagcgcacacagcacctgctgcacgacatgacgcgcgac
gacgagcagtgggcggtgctgttctatgcgctgcgcatgggcctgagggaggaggcactg
cacaccaacctctgccagcaggacgcagacctccacgaggccgtcgcaagcgctttcgcc
ttccaacagccgtcgttcctgcgcaccgctgacgggcgctcgctctatgagcggggtgtg
cttgcgctcctgagcggctctcccgacaattttccgcgtgaacttcagcaggaaaacctc
gaggactacctctggttcaagctgcggtcgctgccggaaaacgacgtggcgcagtacacg
gagttccagaagctcatcagcaagtcatacggcgagtcgcacttccaggcggcacgcaac
ccgtggaactacctgtttgcgcttctgttcacggcgcagtttgagcgggcggttgagttt
ctgcagcgggttgaccttgagctcgctgtgcatctcgccattcccctgcaccactacggc
gccctggacgcaacagaggacatctcagagaacacactggttgagcagcctggagaggtt
gcgtgcctgtacaactttggcctgctggtgcagcggtatgcgcgtctgatcatgcgtcag
tccccagccaccgccctcaactacctctacctcgtcaggtcgatgaagctttcgtcggct
gcggactcaccgtccgtgtttgtcgtaaactttgctgacgtcatcctggaaaacaacgac
cttgccttgctcggtggctacgacacgtccatgcgccaggtgcttggtggcgatcttgtc
cggtttatgccggacatcagcgcccgtcaccgtttcctgcgcgatcttgcgattgaattc
cgctcccggggcaaattcccagaggccatcaggctcttccaggaggcacaggaggatgac
gaggccacaaacctgctcatcgagaagctgacggaggtgattatccttgacgaccacgac
gacattgcgtggagccagtacttggagcgcagccgcttcgtccctgcagacgccccgcgc
cgcgcagacatcgacgtcctcgaaaacgttgtgcaattcatctacgcgtgccaccgcgag
acaacaacagacccgctcttcttctggcaggagctgaaccgcatgcaagtgttcccgctg
cacccggacgaggtcgacacgtgcatgcgcaagatccagtccctcggcaaagaggtgtcg
gccgtgttcccgtcgctcatcttctacgccatgcgcctcacggagcacaagctcagggcg
caccagcagcgcgtctctggccactttgacgtgccagaggaagcgaagaactggcagcag
cgcgggcgtgccctactgacgtttgcggtggagatgggtcacacctttggcgcagagaag
gcgcaggtgcttgagcggctgcagctgctggtcgagtctgtcgagacgagcatgcgcgtg
tttgccggccacccataa
DBGET
integrated database retrieval system
