Salpingoeca rosetta: PTSG_11884
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Entry
PTSG_11884 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
sre
Salpingoeca rosetta
Pathway
sre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PTSG_11884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_11884
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PTSG_11884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
TFIIA
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
16077603
NCBI-ProteinID:
XP_004997011
UniProt:
F2U2F5
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MCTYGFRGEALAALAAISVLTIETRKAEEPTTLCKIIKGGAVIAKGRAGSELREAGTCVT
VTDLFYNLPVRRQRLGPADMDRIKHKMGALALMLPKLALTLTDTQTGHKHVNSSGAVSTR
GVFGRLFGNDKSRHLISLNHIDAARVVEGYISTGVYYAPDLQFVFVNKRPVRRCFLHQVV
ISQLLNSIILAEDPTTTSQGNPFKRKKRNRHAIFVLNIVLPADQVDVTHEPTKSLVSFED
EHAVRELIKRAVRAFLAKHDLLVDPTPYQMTLPELAARGPAAATATATTATTPLTSSSAM
VVLSSSLSRFERSNDEAMHSAPARSSAISSARAATPSVVAHAVTPFTRENNANIRSSGIT
AARLTPRRRHGSAPAVHSMSIPSTLDQDDVSHSRSAQQQQQQQQQQQQQQQQQQQQQQQQ
GCCECSTVACVSNHSAHSRNSSTQLPHTTANHTTDVTTTHGNLNSCDDDDDDEHDAEAQL
ASESQLAPPDAAARLPSRASKLRLFLRRHVASPPAANAHTTAVAGVGGSGGDVTGHNGCD
GSQLKHNHTRADRTSPPPSPRRPQTRAVAAHSLRPRTRGHEDVEAEVNKWKTEALRRWDM
ETTEPYQDPIASLRAIRERRGLSTTHAQRFDNTAFRDFQVLGQVDNKFIACLFRREQEAD
SVIVLIDQHAAHERIRLERLEHEHFRLGSPVRATHVCELDAPWELSLAEGDASAAEQYAT
AIKAWGIHLVRTGPTCVRVTHLPGALVDASGTRQRLLVNQSTVEELIEDEITHVRQNQGR
KRWSIPPTLQDILNTRACHGAIKFGDELSIAQCQDILSDLASCKLPFQCAHGRPSIAPLV
DIAPTLEAQENENNARTIWTDLGPKLKVWTAEHACPVKP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgtacgggttcagaggagaggcactggccgcgctcgctgccatcagcgtgctg
accatcgagacgcgcaaggcggaagagccaaccaccctgtgcaagatcatcaaaggtggc
gcagtcattgccaagggccgtgcgggatcagagctgcgggaggcaggcacgtgtgtgaca
gtcaccgacctgttttacaacctcccggttcgccgccagcggctgggccctgctgatatg
gaccgcatcaagcacaagatgggtgcgctggcgctgatgctgcccaagcttgccctcact
ctcacggacacccagaccggtcacaagcacgttaactcgagtggggccgtgtccacgcgc
ggtgtctttggccgtctctttggcaacgacaagagccgtcacctcatttccctcaaccac
attgacgcagcgcgtgtcgtcgagggatacatcagtaccggtgtttactacgcccccgac
ctgcagtttgtgtttgtgaacaagcgcccggtgcgacgctgcttcttgcatcaggtcgtc
atctcacagctcctcaactccatcatcctggctgaggacccaacaaccacaagccaaggg
aacccgttcaagcggaagaagcgcaaccgccacgccatctttgtgctcaacattgtgctg
cctgcagaccaggtggacgtcacgcacgagccaaccaagtccctcgtcagcttcgaggac
gaacatgcagtgcgcgagctcatcaagcgcgccgtgcgcgcgttcctggcaaaacacgac
ctgcttgtcgacccaaccccgtatcagatgacgctgccggaacttgcggcccgtggtcct
gcagcagcgacggcgacagctacaactgcaacaaccccactcacttcttcgtccgccatg
gtggtactgtcgtcgtcgctgtctcgatttgaacggagcaatgatgaggccatgcactcg
gcgccagctcgctccagtgccatctcatcagcacgagcagcaacgccgtcagtggtcgca
cacgccgtgacgcccttcacccgcgaaaacaatgccaacattcgcagcagtggcattacc
gctgctcggctgacaccgcgtcgacgacacggctcagcgcccgcagtccatagcatgagc
ataccctcaacccttgatcaagatgatgtttcgcacagcagatcagcccaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
gggtgttgtgagtgttcaaccgtggcatgtgtgtcgaatcattctgcccacagccggaac
agcagtacacagctccctcacaccaccgccaatcacaccactgatgtcaccaccacccac
ggcaacctcaactcttgtgatgatgacgacgacgacgagcacgatgcggaggcacagctc
gccagtgaatcgcaactagcaccaccagatgcagcagcacgtctgccttccagggcatcc
aagttgcggctgtttctgcgccgccacgttgcctctccccccgccgccaatgcgcacacg
accgctgttgcaggagttggtgggagtggtggcgacgtaactgggcacaacggctgtgat
gggtcacaactgaaacacaaccacacacgcgccgatcgcacatcaccaccgccctctccc
cgccgcccacagacgagggctgtggcagcccactcccttcgtccccgcacacgtggccat
gaagatgtcgaggctgaagtcaacaagtggaaaaccgaggctttacgcagatgggatatg
gagacaacagaaccgtaccaagatcccatcgcatctctccgagcaatccgggaacgccgt
ggcctgagcacaacacatgcccagcggtttgacaacacagccttccgtgactttcaggtg
ctgggccaagtcgacaacaagttcatcgcgtgtctgttccggcgtgagcaagaggcagac
tctgtgattgtcctcattgaccagcatgccgcccacgaacgcatccgtttggagcgcctc
gaacatgagcactttcgcctcggcagtcccgtccgtgcaacccacgtgtgtgagctggat
gccccgtgggagctttccttggctgagggcgacgcgagtgctgctgagcaatacgcgaca
gccataaaggcctggggtattcacctcgtgcgcacagggcccacatgcgtgcgcgtgacg
caccttcctggtgcgcttgtggacgcttcgggcaccaggcaacgtcttcttgtgaaccag
agcacggtggaggagctcattgaagacgagataacacacgtgcgacaaaaccaaggtcgg
aaacgctggagcatacctcccacattacaggacattctcaacacgagggcgtgtcatggc
gcaatcaagtttggagacgagctatcgatagcacaatgccaggatattctctcggacctt
gccagctgcaaactaccatttcaatgcgcacacgggcgcccctcgattgcgcctcttgtc
gacattgctcctactctcgaagctcaagaaaacgaaaacaacgcccggaccatttggaca
gacctgggcccaaagctgaaagtgtggacggcagaacacgcctgcccagtaaaaccttaa
DBGET
integrated database retrieval system
