KEGG   Salpingoeca rosetta: PTSG_11982
Entry
PTSG_11982        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
sre  Salpingoeca rosetta
Pathway
sre03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    PTSG_11982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sre04121]
    PTSG_11982
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_11982
Enzymes [BR:sre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PTSG_11982
Ubiquitin system [BR:sre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PTSG_11982
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     PTSG_11982
    Noncanonical PRC1 (PRC1.1)
     PTSG_11982
    Noncanonical PRC1 (PRC1.3/1.5)
     PTSG_11982
    Noncanonical PRC1 (PRC1.6)
     PTSG_11982
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_6 zf-Nse zf-rbx1 zf-RING_4 MSMEG_3727_PQQ-assoc DUF3333 zf-C3HC4_4
Other DBs
NCBI-GeneID: 16076415
NCBI-ProteinID: XP_004995828
UniProt: F2U4M6
LinkDB
Position
Unknown
AA seq 267 aa
MDERAEKVDGLTEYEQQRQPQKVISDGRSVSVPIHIFNEEVRCPICLGLIENTYTAMSCL
HRFCAECIQKCLRLGKKECPTCRAPLASRRRLRRDDMFDQIISTVYPSRDIYDEQQSALV
DKTLESSNRQFLVRAMVEGMMHQAKARQRAKGAGQIKTLGRNLHQDVNVAVMAHPRIIEA
SLQLQLVSKDVPLNHSYLNTTPEITGAVLKKFLAKDCAHHPSTPLELTPEDLHLAFESKP
IDDATCLATLTTWSPATSVEIEVSRRV
NT seq 804 nt   +upstreamnt  +downstreamnt
atggatgagcgcgcggagaaggtggatgggctgacggagtatgagcagcagcgccagccg
cagaaggtcatcagcgatggtcgcagcgtctcagtcccgatccacatcttcaatgaggag
gtccgctgccccatctgcctcggcctcatcgagaacacatacacggccatgtcgtgcctt
catcgtttctgtgctgagtgcatccagaagtgccttcgtctcgggaagaaagagtgcccg
acgtgtcgcgcgccactcgcgtctcgccgtcggttacgccgcgatgacatgtttgaccag
atcatatccaccgtgtacccttcacgcgatatctacgatgagcagcagagtgcgttggtg
gacaagacgcttgagtcgagcaatcgccagttcctcgttcgcgccatggtcgaaggcatg
atgcaccaggccaaagcgcgccaacgagcaaaaggcgcagggcaaataaagacgctcgga
cggaacttgcatcaggacgtgaatgttgcggtgatggcgcatccccgcatcatcgaggcc
tcgctccagctgcagctcgtctcaaaagacgtgccgctcaaccacagttatctgaacacg
acacccgagattacgggcgcagtactgaagaagtttctcgcaaaggactgcgcacaccac
ccatcaacaccgctggagctgacgcctgaggatcttcatctcgccttcgaatcaaagccg
atcgacgatgccacctgtctcgccactctcaccacttggtcccctgcgacgagtgttgag
attgaggtgtcaaggagagtgtaa

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