Salpingoeca rosetta: PTSG_12048
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Entry
PTSG_12048 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_12048
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
PTSG_12048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
16075945
NCBI-ProteinID:
XP_004995363
UniProt:
F2U658
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MPSGLARALLDLAVVEGVEQPQTWNAESGAPRPGAASVGSPWFTLLQHAQKGNILKHLAS
RRVDRSEFVAALLESLDDQTRSDSIHAQVLQLLAEWSDVLLAPPEDPSETIAHLISKCTT
MMSDRMKFKAKLISTITTLILVHDYTEKGFQSFINFNMLSVLAGDDVVETALLRRIVCHC
LIDLELAMPGLLSHKLGHIYQLAQTQTTITAQAYAQLLAVVMRNACAVLRIQSTHKWRAD
ILSRVPPELVASHRLNFQSLLSVDDEALTPFFFPPEVLDGPLPLSSFLARPSPPPPSSRH
AHDTRRSAPNTPQRRGAAKPSTSAATTVSAAAVSSSAASTVVPESAIVGPPGILAAAQPV
ESKQAGEDAIQRCVSFLSTAASNATAPSMAHTLHALATLLSQTNLSNQVFHVTAKRLELS
VDHCDIHALLMLLSIFQQRRLLRTKEIVSVRVRLLDLILDPQVPKWRRQLLFTLCFCNRM
LLGKHKTIEDFFPREFESIEMWTRQVDMLASVVGLQAMARIDSDRRSEHSDSRSTITDTS
LRLEVLPDMGALSTMSPDHCLGILRSALDCFQTYMFADSLGISAGARAFFATVYRILVHA
PPPVTQDVSDYLLRLVASQPAFLPLLVNTVTAVSETLGDTTLATAILRKLQDRFVATEAQ
TLMQHIDDYLVLVLRLAQVEGIAPATFLLKLKEILTSTAICRRGEWNRGNRLLQICRCIM
QRNVTEASTLLPLGDVLTTIWQSYRNIDIQDLARLLYMLLVKVSGARLESVLETSLDDLE
QGRIQAFLPADDVDRTRRDHEGIFKATHQLLILKRIKPKQVRKRDTKYRMHVRKPSLTSL
ERVMTASSSNDPVDEPLELPPVDVDVSLRGTLDADGVLKAYAKHVQANMAQASVRLPCRL
SYEVAAGVAKIVRCPEKVFAIQLNLHDDAGHFRETEPVYIPCLRLFQRSSMSTGDDADDM
RDGAAVGSGVRTFWDFELPCHPVEPRPADLHATVTYTDDSGASWRSKVDDIHVAFTDLLQ
QPSLPSGWMYRRAGSDEGMTARPEGEVNAYREVLFGALWRHVGANADASGVVSSKSLDMS
AAEAVAFLRKHFQRFMVVARKSDKQGELARLQILIFVPPQYHILLDCQVLASRTLVHIAS
DHLLSASHLERLLHDEMMLAVGDA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgccatcggggctggcgagggcactgcttgaccttgccgtggttgaaggggtggagcaa
ccccagacatggaacgccgagagtggggcgcccaggccaggcgcggccagtgttggcagt
ccatggttcaccctcctccaacatgcacagaaaggcaacatcctcaagcacctggcatcg
cgacgagtggaccggtccgagtttgtcgcagctttgctggagagtttggacgaccagact
cggtctgatagcattcatgcgcaggtgctgcagttattggcagaatggagcgacgtgctg
cttgcgcctccagaggatccaagcgagaccatcgcccatctcatatcaaagtgcacgacc
atgatgtcggatcgcatgaagttcaaggccaagctcatctccaccatcacaacgctcatc
ctcgttcatgattacactgagaagggctttcagagcttcatcaacttcaacatgctgtcg
gtgttggctggcgacgatgtcgtggagacggcactgctgcggcgcatcgtctgccactgc
ctcattgaccttgagcttgccatgcccggcctcctcagccataagcttggccacatctac
cagttggcacagacgcaaaccaccatcacggcgcaggcgtacgcgcagctgcttgctgtt
gtcatgcgcaatgcgtgtgcggttctccgcatccaaagcacgcacaagtggcgagcggac
atcctcagcagggtgccaccggagcttgtggcctcgcaccgcctcaacttccagtcgctc
ctctctgttgacgacgaagcactcacgccgttcttcttcccgcccgaagtgctggatggg
ccgctaccactgtcctccttccttgcacgcccatcgccaccgccgccatcatcgcggcat
gcacacgacacccgccgctctgctccaaacacaccccagcgtcgcggtgcagcaaaaccg
tccacctctgcagccaccactgtcagtgctgctgctgtatcatcatccgctgcctcgact
gttgtcccagagagcgccatcgtcggcccgcccgggattctggcagccgcgcagcctgtt
gagtccaagcaagctggcgaggacgccattcagcgctgcgtctcgttcctgtcaacggcg
gcctcaaacgccaccgcgcccagcatggcgcacacgctgcacgcgctcgcaaccctgctg
tcccaaacgaacctgtccaaccaggtgtttcacgtgaccgctaaacgcctggagctgagc
gtggaccactgtgacatccacgcgttgctgatgctgctgtccatattccagcaacgccgc
ctgctgcgcacaaaggaaattgtgtccgtgcgtgtgcgtctccttgatcttatcctggac
ccgcaggtccccaagtggcgacgccaactgctgttcacgctctgcttctgtaaccgcatg
ctgctcgggaagcacaagacaattgaagactttttcccgcgtgaatttgaatcaatagag
atgtggacgcggcaggtggacatgcttgcgagtgttgttggccttcaggcgatggcgcgg
attgattccgacaggcgatccgagcattcggactcgagaagtacaatcacagatacgtct
cttcgtttggaggtgctcccagacatgggtgcgctatccaccatgtctcccgatcactgc
cttggcattctccgcagtgccctggactgctttcaaacatacatgtttgcagacagcttg
ggcatatctgcgggcgcacgcgcgttctttgccaccgtgtaccgcatcctcgtccacgca
ccgccaccggtcacccaggatgtgtcggactatttgcttcgcctcgttgcatcgcagcct
gcgttcctcccgctgcttgtcaacactgtgaccgctgtgagcgaaacgcttggtgacacc
acgctcgctacggccattctccgcaaacttcaggaccgatttgtggcgacagaagcacag
acgttgatgcagcacattgacgactacctcgtcctcgtcctcaggttggcgcaggttgaa
ggcattgcccccgcaacgtttctgctgaagctcaaggagatcctcacatccacagcaatt
tgtcgccgcggcgagtggaatcgcggcaatagactgttgcaaatttgtcgatgcatcatg
cagcgcaacgtcaccgaggccagcacgcttctgccgctgggagatgttcttaccacaatc
tggcagtcctaccgcaacatcgacatccaggatctggctcgcctgctgtacatgctgctg
gtgaaggtgtctggcgcgcgtttggagtctgtgctggagacatcactggacgacctcgaa
cagggccgcattcaggcgtttcttcctgctgacgacgttgatcggacacggcgcgatcac
gagggaatcttcaaggcaacgcaccagctcctcattctcaagagaatcaagccaaagcaa
gtccgcaagcgagacaccaagtaccggatgcatgtgcgcaagccgagtctgacgagtctg
gagcgggtgatgacggcgagcagcagcaacgaccccgtagacgaaccgcttgagcttccg
ccggtcgatgtcgacgtgtcgctacggggcaccctcgatgcagatggcgtcctgaaggcg
tacgccaaacacgtgcaggccaacatggcgcaggcgagcgtgcgtttgccgtgccgtctc
tcttatgaggttgcggcaggcgtggccaagattgtccggtgtcccgaaaaagtgtttgcc
atccaactcaacctccacgatgacgctggtcatttccgggagacggagccagtgtacatc
ccgtgtctgcggctgtttcagcgctcgtccatgtcgacaggagatgacgcggatgacatg
cgggacggcgctgctgttggatcgggagtgcgcacgttttgggactttgagctgccgtgc
catcctgtcgagccgcgtcccgctgatttgcatgcgacagtgacgtacacggacgacagc
ggcgcgtcgtggcgaagcaaggtcgacgatatccacgtggccttcactgatttgctccag
cagccatcgctgccgtcgggctggatgtaccgccgcgccggcagcgacgaggggatgaca
gcgcgcccggagggcgaggtgaacgcatacagggaggtgctgtttggtgctctgtggagg
cacgttggggcgaacgcagatgcctctggtgtcgtgtcgagcaagtctctcgatatgagc
gcggcagaggccgtggcgttccttcgcaagcactttcagcggttcatggttgtagcacgg
aagtcagacaagcaaggcgagctggcgcgactgcagatcttgatctttgttcctccacaa
tatcatatcttgcttgattgccaagtgctggcatcgcgcacgctcgtgcacattgcttcc
gaccacctgttgtccgcctcccacctcgaacgcctcttgcatgacgagatgatgcttgca
gttggagatgcgtag
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