Salpingoeca rosetta: PTSG_12254
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Entry
PTSG_12254 CDS
T04136
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00900
Terpenoid backbone biosynthesis
sre01100
Metabolic pathways
sre01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PTSG_12254
Enzymes [BR:
sre01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
PTSG_12254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX
Isochorismatase
DUF6683
Motif
Other DBs
NCBI-GeneID:
16074240
NCBI-ProteinID:
XP_004993665
UniProt:
F2UAG7
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MSVDLSSYDDEQVRLMAEECILVDEDDKVLGHDSKKNCHLMENINKGLLHRAFSVFLFNS
EGKLLLQQRSDEKITFPGCWTNTCCSHPLFRPEELEEENQKGVRFAARRKLEHELGIDPS
KISLDEFKFLTRIKYLAPSDGMWGEHEVDYILFLQKDIEHSPVPNEVQATKWVSPNELRD
LMANAEQTGTKITPWFKLIVEK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggatctttccagctacgatgacgagcaggttcggctcatggccgaggagtgc
atcctcgtcgatgaggatgacaaagttcttggtcacgactccaagaagaactgccatttg
atggagaacatcaacaagggccttcttcaccgcgcattcagcgtgttcttgttcaactcg
gagggcaagttgttgctgcaacagcgctccgatgagaagattaccttccctggctgctgg
accaacacgtgctgctcccaccctctcttccgcccagaggagcttgaggaggaaaaccaa
aaaggtgtcaggtttgctgctcgtcgcaagctcgagcacgagctcggcattgacccttcc
aagatctccctggacgagtttaagttcctgacgcgcatcaagtatcttgcgccgtccgat
ggcatgtggggcgagcacgaagttgactacattctgttcctccagaaggacattgagcac
agccctgtcccaaatgaggtgcaggcgaccaaatgggtttcgccaaacgaactgcgtgat
ctcatggccaacgccgagcagactggcaccaagatcaccccatggttcaagctcatcgtc
gagaagtaa
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