Salpingoeca rosetta: PTSG_12299
Help
Entry
PTSG_12299 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_12299
Enzymes [BR:
sre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PTSG_12299
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PTSG_12299
Prokaryotic type
PTSG_12299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Sporozoite_P67
New_glue
Motif
Other DBs
NCBI-GeneID:
16074496
NCBI-ProteinID:
XP_004993918
UniProt:
F2UA62
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MGNWFSSAVSAVLPANVRDALLQDQQHRHDDDIDSGEPAMKRAKVARTTDDDDDTMAVST
DFWPAANAPYVQLKPLTDEDVFITEFISTHKGFSGVIKQRYSDFHVTEVMPNGELAQLTT
TVPPEGELPTNRGKLSFNKDAIDKLEGLLTLEEVEALVQMCYHPRKERVIVSCSDDRDER
TRLHTLIKEVFPHLYSRTLTPDMDDPLMPAAVAEATADTASKGNSAATATATTTTSSSSS
AGGDEARGYRLEVTREGSSVSKERVAPGFRHGGRRDDDRHSQGQYCHFTLCKENMDTNAC
VRLISRKLRCKPKELSYAGTKDKRAITTQRMCIRRVRAPRLACLNRCLRGMTLGDFKYEN
AYLRLGDHQGNRFEIVLRNCTGTDEQITQALTSLGTNGFINYFGMQRFGVCAVPTHAVGL
AMLKRNFKQAIHLLLPPNARLHDGSDRACEHYHRTGDAHRALVMMPRKCDVERTILQTLE
KQPNGFATALQTLPRLHRTLYMHAYQSMVWNRVVSLRLRTFGRKVLVGDLVYNKDVKFNI
RAADQRKKHAVTVTAETLHKYTIHDVLMPIPGQDVPYPNNEVRDMYASVLAEDGLDIDNL
PHYILECVLNGDLRYMITLPGNVTWRTMRYDDVTVPLLQSPIDRLQAAAEGKTLPDPNVP
TGQYRALILGFTLDVSCYATMAIREVLKTPTDKAFQSALNAYSNKGGQGNGAKRNHRTNN
NNNARSTR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggggaactggttctccagtgctgtgtcagctgtgcttccagccaacgtccgggatgcc
ctgttgcaagatcagcagcatcgccacgacgatgatatcgacagcggagagcctgccatg
aagcgcgccaaggtggcacggactaccgatgatgacgatgacaccatggccgtatctacc
gacttctggccggcagccaacgcaccctacgtgcagctgaagccactgacagatgaagac
gtgttcatcacggagtttatcagcacccacaagggcttcagcggcgtcatcaagcagcgc
tactccgacttccacgtgacggaggtgatgcccaacggcgagctagcacagctgacgacg
acggtgccgccagagggcgagctgccgacaaaccgcgggaaactgagcttcaacaaggac
gccatcgacaagctggagggtcttctcacgttggaggaggtggaggcgctggtgcagatg
tgctaccacccgcgcaaggagcgggtgatcgtctcctgcagcgatgaccgtgacgagcgc
acacggctgcacaccctcatcaaggaggtgttcccgcacctctactcccgcacgctcacc
ccggatatggacgacccgctcatgccggcagccgtggccgaggcaacggccgacacggcg
tcaaagggcaacagcgccgccaccgccaccgccaccaccaccaccagcagcagcagcagt
gctggcggggatgaggcacgcgggtatcgacttgaggtgacacgtgagggcagcagcgtg
tccaaggagcgtgttgcacccgggtttcgacatggtgggcggcgcgacgatgaccgccac
tcgcagggccagtactgccactttacgctgtgcaaggagaacatggacaccaacgcgtgc
gtgcgcctcatttctcgcaagctgcgctgcaaaccgaaggagctcagctacgcgggcaca
aaggacaagcgcgccatcaccacccagcgcatgtgcattcgtcgtgtgcgcgctccgcgg
ctcgcctgtctcaaccgttgtctccgaggcatgacgcttggggacttcaagtacgagaac
gcgtatctgcgactgggcgaccaccagggaaaccgctttgagattgtcctccgaaactgc
accggcacagacgagcagatcacacaggcgctgacgtcgctcggcacgaacgggttcatc
aactactttggcatgcagcggttcggggtgtgcgcggtgccaacacacgccgtcggcctt
gccatgctcaagcgaaacttcaagcaggccatccacctcctcctcccgccgaacgcgcgt
ctgcacgacgggtctgaccgcgcgtgcgagcactatcaccgcaccggtgacgcccaccgc
gccctcgtcatgatgccgaggaagtgcgatgttgagcgcaccatcctgcagaccctcgag
aagcagccaaacgggtttgcgactgcgctgcaaacgctgccacgactgcaccgcacgctg
tacatgcacgcgtaccagagcatggtgtggaaccgcgttgtgtcgctgcgcctccgcaca
ttcggccgcaaagtcctcgtgggcgacctcgtctacaacaaggacgtgaagttcaacatc
cgcgcagccgaccagcgcaagaagcatgccgtgacggtgacggcggagacgctgcacaag
tacacgatccacgatgtgctcatgcccatcccgggccaggacgtgccatatcccaacaac
gaagttcgggacatgtacgcgtctgttctggcggaggacgggcttgacattgacaacctg
ccgcactacatcctggagtgtgtgctgaatggggacttgcgttacatgatcacgctgcca
ggcaacgtcacatggcggacgatgcgttacgatgacgtgacggtgccgctgctgcagtcg
cccatcgaccgcttgcaggctgctgctgagggcaagacgctgcctgacccgaatgtgccc
acaggacagtaccgtgcgctgattctcggcttcacactcgacgtgtcctgctacgcaacc
atggccattcgcgaggtcctcaagacaccgacagacaaggcattccagagcgctctcaac
gcgtacagcaacaagggcgggcagggcaatggcgccaaacgcaaccaccgcaccaacaac
aacaacaacgctcggagcacgcgctag
DBGET
integrated database retrieval system
