KEGG   Salpingoeca rosetta: PTSG_12341
Entry
PTSG_12341        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
sre  Salpingoeca rosetta
Pathway
sre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PTSG_12341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_12341
Enzymes [BR:sre01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     PTSG_12341
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     PTSG_12341
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     PTSG_12341
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     PTSG_12341
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     PTSG_12341
SSDB
Motif
Pfam: DcpS_C zf-C2HE FHA_2 HIT
Other DBs
NCBI-GeneID: 16074071
NCBI-ProteinID: XP_004993494
UniProt: F2UBR5
LinkDB
Position
Unknown
AA seq 403 aa
MSRFVVALRPCGQLRERLTEPLELSAGVHILGRSPQTKVKQQLCSRRQIELDVDTARGTV
TLKQQLGPNACSVNGQTISRGNSVAVSRGARISMLADSPDETTFTLDIHEYAPCGMTTPE
STPLTQFDTSASSTASSVRPDATSFDTKPSAHAPAITINLTSNTGAATITITNNITAADD
ADSSRLTTPGGDAVTEEDTGQPKQRSDKQQRRVTSECVDHWANALTELVRHPERHADDIV
YETVDTLVINDKYPKARYHFLVLPKRVITDLTCLTRHDRHLIQRLQETAMTFGKMIQEDK
PGVKFHTGFHAVPSMNQVHLHLISQDFDSVSLKNKKHWNSFNTPYFVPARKVYEMLKNEG
RIHFDEAKYKEYLKKPLVCHRCRQEMRNMPTLKRHLKEHLTNP
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgtcgcggtttgtggtggcgctgcggccgtgtggacagctgcgtgagcggctcacagag
cccttggagctgagtgctggagtgcacatcctggggcgaagcccacaaaccaaagtgaag
cagcagttgtgcagccgacgccagattgagctggatgtcgacaccgcccgcggcaccgtc
accctcaagcagcagcttggcccaaacgcatgctctgtgaatggacaaaccatcagccga
gggaacagtgtggcggtttcgcgaggcgcccgcatctccatgttggcagacagtccagac
gagaccacgttcaccctggacatccacgagtacgcgccctgtggcatgacaacgcccgaa
tcaacgccgctaacccagtttgacacgtcagcgtccagcaccgcgtcttctgtacgacct
gacgcgactagttttgacacaaagccaagcgcacatgccccagccatcaccatcaatctc
acaagcaacactggcgccgccacaatcaccatcaccaacaatatcactgctgcagacgat
gctgattcatcgcgcttgacgacaccaggcggtgacgccgttactgaagaagacactgga
cagcccaagcagcgcagcgacaagcagcagcgacgtgtcaccagcgagtgtgtggaccac
tgggcaaatgcgctgacggagttggtgcgtcacccggagcgccatgctgatgacattgtc
tacgagaccgtcgacacgctcgtcatcaacgacaagtacccaaaggcgcggtaccacttt
cttgtgctgcccaaacgcgtgatcacggatctgacgtgcctcacccgacatgaccgccac
ctcatccagagactgcaggagacagccatgacctttggcaagatgattcaggaggacaag
ccaggcgtcaagtttcatacggggtttcacgccgttcccagcatgaatcaagtgcacctt
cacttgatttcgcaggatttcgactctgtgtccctcaagaacaagaagcactggaactcg
ttcaacacgccgtatttcgttcctgctcgcaaggtgtatgagatgctgaagaatgagggc
cgaatccactttgatgaagcaaagtacaaggagtatttgaagaagccgctggtgtgccac
cggtgtcgccaggagatgcgcaacatgcccaccctcaagcggcaccttaaggagcacctc
accaacccctag

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