Salpingoeca rosetta: PTSG_12465
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Entry
PTSG_12465 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K13174
THO complex subunit 5
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_12465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_12465
03041 Spliceosome [BR:
sre03041
]
PTSG_12465
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PTSG_12465
Spliceosome [BR:
sre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PTSG_12465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
16072607
NCBI-ProteinID:
XP_004992048
UniProt:
F2UFM3
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MGKRKASDASVAKKAKTTDNGSGGGGAGSAAGRVSAEGITGLVDTVKQDLEAIKTAALAN
ADEEDTATTDELNARLKTFAAKVTAIKILARQLAVRVVDSTERVKQAKQGMEATHLQLQN
VLYEHLHVLNEIKTCQSYRSRAEDLELVTRDEYLASDAASGEDKDEHHEMLGRLQFEAEE
RARLRSDLEERQYRKTAISNINEKKRAMIKAAPDAVTHLLDACNKCSDVFGPASMPHDEL
LAKFRASHPLADRLPAPLHALLMTVAGYNIAYEARSWSVHIAGDAAAVDKFEAEVDACET
YMYALARKEQGDNDDVEDERDEDDEDEEEGGKRSKDAHKSQTGQSKTATAPANLHQLLFT
PHPLSLELKSTPDAAKSLRLVFRHYPLLHIVTTTEQSPKTQLPVLQHVAPADSGKTPSSP
SSPASPPPPVMFMLDRLGVEDYRPRLTGTIVPAVQDIAGLTDAGRKTRPWHWWH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgcaaggcaagcgatgcttctgtggccaagaaggccaagaccactgacaat
ggcagtggtggtggtggtgctggtagtgctgctggtagagtgagcgcggagggcattacg
gggcttgttgacaccgtgaagcaggacctggaggccatcaagactgctgccttggcgaat
gccgacgaagaagataccgcaaccacggatgagctgaacgctcgtttgaagacgtttgcc
gccaaggtcaccgccatcaagatccttgcacgtcaactggctgtgcgtgtcgtcgattcc
acagagcgcgtcaagcaggccaaacaaggcatggaggcgacgcacctgcagctgcagaac
gtgttgtacgaacacctccacgtgctcaacgaaatcaagacctgtcaaagctaccggtcg
cgagcagaggacctggagcttgtcacgcgggacgaatatcttgcgtcggatgcagcgagt
ggcgaagacaaagacgagcaccacgagatgctcggccgcctccagttcgaggccgaggag
cgcgcaaggctgcggagtgatcttgaggagcggcagtaccgcaagaccgccatctccaat
atcaacgagaagaagcgcgccatgatcaaggccgcgccagatgcagtcacgcacctgctt
gacgcgtgcaacaagtgctcagacgtgtttggcccagccagcatgccccacgatgagctg
ttggccaagttcagggcgtcccacccactggctgatcgcctacctgccccgctccacgct
ttgctcatgactgtcgcaggctacaacatcgcatacgaagcgcgatcatggagtgttcac
atcgccggcgacgccgctgcggtggataagttcgaggcagaggtggacgcgtgcgaaaca
tacatgtacgcattggcgcgcaaggagcagggcgacaacgacgacgtcgaagatgaaaga
gatgaggatgatgaagacgaggaggaaggtggcaagcgaagcaaggatgcacacaagagc
caaactggacagtcaaagacagcgacggcgccagccaacctccaccagctgctgttcacg
ccgcacccgctctccctcgagctcaagtcaacgccagatgcagcgaaatcgcttcgtctc
gtgttccgccattacccgctcctccacatcgtcaccaccacggagcagagcccaaagaca
cagctgcctgtgctgcagcacgttgctccggcagacagcggcaagaccccttcgtctcca
tcgtcgccggcatcgccaccaccgcccgtcatgttcatgctcgacagactcggcgtggag
gattaccgccctcgcctgaccggcaccatcgtgcccgccgtccaggacatcgcgggactc
acagacgcaggtcgcaaaacacgcccatggcattggtggcattag
DBGET
integrated database retrieval system
