KEGG   Salpingoeca rosetta: PTSG_12674
Entry
PTSG_12674        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K10803  DNA-repair protein XRCC1
Organism
sre  Salpingoeca rosetta
Pathway
sre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PTSG_12674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_12674
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     PTSG_12674
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT LIG3_BRCT BRCT_2
Other DBs
NCBI-GeneID: 16071613
NCBI-ProteinID: XP_004991051
UniProt: F2UHT0
LinkDB
Position
Unknown
AA seq 649 aa
MEVLVARSASGSSDTEYKTLLPVTKLMSPSESKDWINVQAVHMFGDEKFNKDTRKHRWDS
VRVVLRQPYCKTEEYGLTFIKVHTAGGATSGGAASPSSSSSPAATTSSATASPSAPRTLG
LFKLRREPTTSLSAGGLFFKRKSDKGDTATSALREATRRHEEEKARRAKDAKAATPPTLP
LTTDAPPSVPPPPSSSSTSPSWSSRATKGSSSPPTKRDRTPPIPATLPHPAHAPATKRAP
PTPPPTMTTTTTATTAKRSTPSPPRTRSPPPPSSSKPPAPRTKTTGRVRTPPLPRTMRRS
SSSGGGDGDGGRGGKPAPKRAKTVPASTADGAKDKSKILSGVVFVLSGFQNPFRAELRDK
GLAMGASYRPDWSRSCTHLISAFENTPKAKQARRTGGHVVTKEWILHAYDRNTRLRESSY
TFDSRPRPRYTGMAGGSSDEDDEDNGDDDDDDDLSEVDDFDPTTAMLDDSDAEYEPPEKG
AVARTTTTDDVYDADTDVDEDEVHDSGDAAGSGSGVHKAAPARDTTRTPPLPTAVSAPDK
NDDDDDDAEDEELPYLPDFLSGVNVFFYQLDKPKLLKELTRYMVAYGGRVDAYMAPDTTH
VITERPWDAAFDDALKDNPRLVFVRPSWLLQCHTTQAKVDTFKHRIKKR
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggaggtgctggttgctcgcagcgccagtggcagctccgacacggagtacaagacactg
ctgccagtgacgaagttgatgtcgccatctgagagcaaggactggattaacgtgcaggcg
gtgcacatgttcggtgacgagaagttcaacaaggacacgaggaagcatcgatgggacagt
gtacgggttgtcctccgtcagccatactgcaagactgaggagtatggactgacattcatc
aaggtccacacggcgggcggtgccacaagcggcggagcggcctccccctcatcctcatca
tcgccagcagccacaacatcctcggcaacggcgtcaccatcagctccgcgcaccctgggt
ctgttcaagctgcgacgtgaaccgacaacctccctcagcgccggcgggctgttcttcaag
cggaaatcagacaagggcgacacagcaacatcagccctcagagaggcgacacgaaggcat
gaggaggaaaaggcgcgcagagcaaaagacgccaaggcagcgacaccgcccacactcccg
ctgacaacagatgcgcccccgtctgtcccaccaccaccatcgtcatcgtcaacgtcaccg
tcctggtcatcccgtgcaaccaaggggtcgtcctccccaccgacgaagcgagacagaaca
ccgcccatacccgcaacgctccctcacccagcccacgcgccagccaccaagcgagcaccg
ccaacaccaccaccaactatgacgacaacaacaacagcaacaacagcaaaacgatcgaca
ccatccccgcctcgaacgcgctcacctcccccaccatcatcatccaaaccaccagcgcca
aggacaaagacaacgggccgtgtacgcacgccaccgctgccacgcaccatgcgccgtagc
agcagcagcggtggtggtgatggtgatggcggtcgaggtggaaagccagcgccgaagcga
gcaaagaccgtgcctgcaagcacagctgacggtgccaaggacaagagcaaaatcttgagc
ggcgtcgtgtttgtgctcagcgggttccagaacccctttagggctgagctgcgtgacaaa
gggttggccatgggggcatcatatcgcccggattggtcccgctcctgcacgcatctcatc
agcgcattcgaaaacaccccaaaggccaagcaggccaggcggactggcgggcacgtggtg
acaaaggagtggattctacacgcgtacgaccgcaacacgcgcctccgggaatcaagctac
acgtttgattcgcgcccacggccacgctacacggggatggcgggcggaagcagcgacgaa
gacgacgaggacaatggtgatgatgatgacgatgatgatctgagtgaagtggacgatttc
gatccaacaacagcaatgctcgatgacagcgacgccgaatacgaaccaccagagaaggga
gcggttgctcgaacgacgactacagatgacgtgtacgatgcagacacggacgtggacgag
gatgaggtgcatgacagcggagatgctgcgggcagtggcagcggcgttcacaaggccgca
ccagcacgcgatacaacgcgcacccctccgctccccaccgccgtgtcggcaccagacaag
aacgacgacgacgacgacgacgcagaagatgaagagctgccgtacctgcctgatttctta
tcaggcgtcaacgtcttcttctatcagcttgacaagccaaagctgttgaaggagctgacc
cggtacatggtggcttatggtggccgcgtggacgcatacatggctccagatactactcac
gtcatcacagagcgcccctgggacgctgcgtttgacgatgcgctgaaggacaacccgcgc
ctggtgtttgtgcggccgtcgtggctgctgcagtgccacacaacgcaggccaaggtcgac
accttcaagcaccgcatcaaaaaacgctga

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