Salpingoeca rosetta: PTSG_12874
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Entry
PTSG_12874 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sre
Salpingoeca rosetta
Pathway
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_12874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_12874
Spliceosome [BR:
sre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PTSG_12874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
16070158
NCBI-ProteinID:
XP_004989608
UniProt:
F2UMD6
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MAQNLNPDQIRALIEQKKREIEQRKQMVAGVATPTPAGMQAGARTPLPGGAQTPLPTGAH
TPMPAGLRTPMPHGVATPLPGGITTPAPHGMPGGVTTPLPAGVQTPKPLLPLPNGQLGDL
QAKVKEQLASLQKRAADEGVKKPRSIMMDASGRMVDASGNVIHMERRVPELSVNKRAKKR
EELTKMVEAQQEEDIADNPYYDERLEMKPKERKRRAFRFKEKGYYLDQADRERAKAKLEK
LQAEIASAAQKTGISKMAVVAPKKEELEVSSVPDVEWWDQVILNGGYEKLDSGDPEFNDI
TNLVQHPITFEPQDANKVVATPVYLTKKEQKKMRRQRRRAENEEKTEKIRLGQMEAPAPK
VKISNLMRVLGTEAVADPTKVEAIVKAQMDLRQKQHKEHNEAMQLSKEERSAKKAAKLKE
DTTEAVHVALFRVGSLRDERHKFKVQMNAQQYNLTGAAVMTADMNIVVVEGGPRGIKRYK
RLMTHRIKWAGQDAADDESEEEEEGEETKKRNSCDLVWEGLVTKRNFKDFGMKLFRSETL
AREWLDKKNAAHYWDLCFSEAAAPQE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaacctcaacccggaccagatccgggcgctcatcgagcagaagaagcgcgag
attgagcagcgcaaacaaatggtggctggcgtagccacgccgaccccggcagggatgcag
gctggcgcccgcacacctttgcctggtggcgcacagactcctctgcctacaggtgcacac
acgcccatgcccgctgggctgcgcacgcccatgccacatggcgttgcaactccactgccg
ggcggcatcaccacgccagcgccccacggcatgccaggaggtgtcacaactcctctccca
gctggcgtacaaacaccaaagccattgctgccgcttccaaatggccagctcggcgacctg
caagcaaaggtgaaggagcagcttgcaagtctgcagaagcgcgcagcagacgaaggcgtg
aagaagccgcgcagtattatgatggacgcgtctgggcgcatggtcgacgcatcaggcaac
gtgattcacatggagcggcgtgttcctgagttgtcggtgaacaagcgcgcgaagaaacgc
gaagagctgacgaagatggttgaggcgcagcaggaggaagacattgccgataatccgtac
tacgacgagcgactggagatgaagccaaaggagagaaaacgtcgtgccttccgcttcaag
gaaaagggctactaccttgaccaagcggatcgggagcgagcaaaggccaagttggagaaa
cttcaggcggaaattgcgtccgcagcgcaaaagaccggcatctcaaagatggctgttgtt
gcgccgaagaaggaggagcttgaggtgtcaagtgtgccagatgtcgagtggtgggaccag
gtcatcctcaacggcggatatgagaagcttgactcgggcgatcccgagttcaacgacatc
accaatctcgtgcaacatccgattacgtttgagccgcaagacgcaaacaaggtcgtggca
acaccggtctacctcacaaagaaagaacagaagaagatgcggcggcagcggcggcgggcg
gagaacgaggagaagacggagaagatccgtcttgggcagatggaggcgcccgcgcccaaa
gtcaagatcagcaacctcatgcgcgtgctcggcacagaggccgtggcagacccaacaaag
gttgaggcgattgtgaaggcgcaaatggatttgcggcagaagcagcacaaggagcacaac
gaggcaatgcagctctccaaggaggagcgcagcgcaaagaaggccgcgaaactgaaggag
gacacgacggaggccgtgcacgttgcgctgttccgggtgggcagcctgcgcgacgagcgc
cacaagttcaaagtgcagatgaacgcgcagcagtacaacctcaccggcgccgctgtcatg
accgctgacatgaacattgtcgtggttgagggtggaccacgcggcattaagcgctacaag
cggcttatgacccatcgcatcaagtgggccggccaagacgcggccgacgatgagagcgag
gaggaggaggaaggagaagagacgaagaagcgcaactcctgcgatctcgtgtgggagggt
cttgtgaccaagcgcaacttcaaggactttggcatgaagctcttcagatcagagacgctt
gcgagggaatggttggacaagaagaatgcagcgcactattgggatctctgcttctcagag
gccgcagcaccacaagaatag
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