Sediminicoccus rosea: LHU95_01035
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Entry
LHU95_01035 CDS
T08103
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00300
Lysine biosynthesis
srf00470
D-Amino acid metabolism
srf01100
Metabolic pathways
srf01110
Biosynthesis of secondary metabolites
srf01120
Microbial metabolism in diverse environments
srf01230
Biosynthesis of amino acids
Module
srf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LHU95_01035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LHU95_01035 (dapF)
Enzymes [BR:
srf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LHU95_01035 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UPY37304
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Position
219894..220712
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AA seq
272 aa
AA seq
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MQVPFLKMHGLGNDFVVLDARPKPLTLPAETIRWVGDRHRGVGFDQLITLEPASDADVFF
RFHNSDGSEAGACGNGTRCVASLVLAETGRQNISIRTIAGLLGAERLADGTVRVDMGPPR
LGWRDVPLAREMDTLHVPMQAEGVGDAACCSMGNPHANFFVPDLAALDIPRIGPLLEHHP
LLPDRANIGFVQVLAQDHLNLIVWERGAGFTLACGSGACAALVNARRRGLVQARCTVTLP
GGDLVIEQREDGHVLMSGPVATSFRGVLDLAS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcctttcctcaagatgcatgggctgggcaacgacttcgtcgtgctggatgcg
cggcccaagccgctcaccctgcccgccgagaccatccgctgggtgggggaccggcatcgc
ggcgtgggcttcgaccagctcatcacgctggagcccgcgagcgacgccgatgtcttcttt
cgtttccacaattccgacgggagcgaggccggggcctgcggcaatggcacgcgctgcgtg
gcatcactcgtcctggccgagacggggcgccagaacatctccattcgcaccatcgccggc
ctgctcggcgccgagcgcctggcggatggcaccgtccgcgtggatatgggcccgccacgc
cttggctggcgggatgtgccgctggcgcgggagatggacacgctgcacgtccctatgcag
gccgagggcgtgggcgatgccgcctgctgctccatgggcaacccgcatgccaatttcttc
gtgcccgatctggcggcgctcgatatcccccgcatcggcccgctgctggagcatcacccc
ctcctgccggaccgcgccaatatcggcttcgtgcaggtcctggcgcaggaccacctgaat
ctgatcgtctgggagcgtggcgccggctttaccctggcttgcggctcgggcgcctgcgcg
gccctggtgaatgcgcggcgccgcggcctggtgcaggcgcgctgcaccgtcaccctcccg
ggcggcgatctcgtcatcgagcagcgcgaggatgggcacgtgctgatgagtggcccggtg
gcgacgtcctttcgcggagtgcttgaccttgccagctga
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