Sediminicoccus rosea: LHU95_01110
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Entry
LHU95_01110 CDS
T08103
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
srf
Sediminicoccus rosea
Pathway
srf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_01110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_01110
Transporters [BR:
srf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LHU95_01110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UPY37317
UniProt:
A0A9E7AK84
LinkDB
All DBs
Position
complement(234337..235932)
Genome browser
AA seq
531 aa
AA seq
DB search
MTPTNIPRRVLGGAGLLAALRPGRGMAQAAPLRIGALTDPSMDPHFLYLTTNMAYSQHLF
DALSVKDENSLALPGLTESWRPLDERRWEFTLRRGVKFHDGSDLTAADVKFSIERVPNIP
ANPSPYTPNLRGITAVEILDDHRLRFTTAGPVPVLYGTLGAIYIVSHRAAAGAMPADFRS
GRAAIGTGPYRFGEYLPAQRLELTRWEGYWGPKPAFARVQFRFIPNGGARLAALLAHEVD
VADFLPPELLNSLRGNPQVQILSRPSDRVIYLVPDVAREVSPFIRGRDGQPLATNPLKDV
RVRRALSLAINRDGLARQVMDGLADPIGQIVPRGYGGYDDGLAPDPFDPERARRLLAEAG
YPNGFQLTLHGPNDRYVNDARVLQAVGAMFTRIGIETRVEVMPRNMYFGRANPPRMEFSL
SLIGWGSAGEGESGYGLATLLHSRQPERGLGGINNGGYANAAFDAALQTALARFSMAERH
AALQSAMRIAMEDVAVIPLYVQHSAIAVRRGINYLVRDDEKTIAMQASPAG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaccaatattccgcgccgggtgctcgggggcgcaggattgctggcggccttg
cgcccgggccggggcatggcccaggccgcgccgctgcgcatcggcgcgctgaccgacccc
tcgatggacccgcatttcctctatctcacgaccaacatggcctattcccagcacctgttc
gatgcgctctcggtgaaggatgagaattccctggccctgccgggcctcaccgaaagctgg
cgcccgctggatgagcggcgctgggaattcaccctgcggcgcggcgtgaaattccatgat
ggcagtgacctgacggcagccgatgtgaaattcagcatcgagcgcgtgcccaatatccca
gccaatcccagcccctacacgcccaatctgcgcggcatcaccgcggtggagatcctcgac
gaccatcgcctgcgcttcaccaccgcggggcccgttcccgtgctctacggcacgctgggc
gcgatctacatcgtctcccatcgcgcggcggcgggcgccatgccggcggatttccgctcc
ggccgcgccgccatcggcaccggaccctatcgcttcggcgaatatcttccggcccagcgc
ctggagctcacccggtgggaggggtattggggtcccaagcccgcctttgcccgcgtgcaa
ttccgcttcatccccaatggcggcgcccgcctcgcggcgctgctggcccatgaagtggat
gtggcggatttcctgccgccggagctgctgaattccctgcgcggcaacccgcaggtgcaa
atcctctcccgcccctcggaccgggtgatctacctggtgcctgacgtggcgcgcgaagtc
tcgcccttcatccgcggccgcgacggacagcccctggcaaccaatccgctgaaggatgtg
cgcgtgcgccgcgccctctcgctggccatcaaccgggacgggctggcgcggcaggtgatg
gatgggctggccgacccgatcgggcagatcgtcccgcgcggctatggcggctatgatgat
ggcctggcgcccgatccgttcgaccccgagcgcgcccgccgcctgctggccgaagcgggc
tacccgaacggcttccagctcaccctgcacgggcccaatgaccgctatgtgaatgacgcc
cgcgtgctgcaggcggtgggcgccatgttcacccgcatcggcatcgagacgcgggtggag
gtgatgccgcgcaacatgtatttcggccgcgccaatccgccccggatggagttcagcctt
tcgctcatcggctggggcagcgcgggtgagggcgagtccggctatggcctggccacgctg
ctgcacagccgccagccggagcgcggcctgggcggcatcaacaatggcggctacgcgaat
gcggccttcgacgcggcgctgcagaccgccctggcccgcttcagcatggccgagcgccat
gccgccctgcaaagcgccatgcgcatcgccatggaggatgtggcggtgatcccgctctat
gtgcagcactcggccatcgcggtgcgccggggcatcaactatctggtccgcgacgacgaa
aagacgatcgcgatgcaggccagcccggccggctga
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