KEGG   Sediminicoccus rosea: LHU95_03275
Entry
LHU95_03275       CDS       T08103                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
srf  Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:srf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:srf02044]
    LHU95_03275 (tssC)
Secretion system [BR:srf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LHU95_03275 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UPY37728
LinkDB
Position
complement(685057..686553)
AA seq 498 aa
MSGTQAQPGAAGTTTTEEGGVSFLDQVIGATRQTEKDRAQDLIKALTEEALKGTVTYSKN
LTQTFNRAIAEIDRKLSDQLNAIIHHEKFTKLEGSWRGLNHLVMNSETGTSLKIRLLQAS
KRELNRDLTRAVEFDQSGLFKKIYENEFGTPGGEPYGALIGDYEWTNHPDDVETLRLMSN
VAAAGFAPFISAAGPGMFGFSDYRELSKPRDLSKIFETQEYAKWRSFRDSEDSRFVTLVL
PRVIARLPYGANTKPIDEFAYEEAPFNADGSAKAMEHNEYCWMNAAYVHAARLTDAFAQY
GWCTAIRGAEGGGKVTNLPTHTFTSDDGDMDAKCPTEIGITDRREAELSNNGFLPLCHYK
NTDYSVFFGAQTTQKPKKYDRPEATANAAISARLPYIMATSRFAHFLKVMARDKIGSFME
ASDCEVWLNRWIQNYVNPIEGAGQESRAKYPLREAKVEVKEIPGKPGSYNAVAYLRPWLQ
MEELTTSMRMVARIPQKS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagtggaacccaggcccagcccggcgctgccggcacgaccacgacggaagagggcggc
gtctccttcctcgaccaggtcatcggcgccacgcgccagaccgagaaggaccgcgcccag
gacctgatcaaggcgctgaccgaggaagcgctgaagggcaccgtcacctacagcaagaac
ctgacgcagaccttcaaccgcgccatcgccgagattgaccgcaagctgtccgaccagctg
aacgcgatcatccaccatgagaagttcaccaagctcgaaggctcctggcgcgggctgaac
cacctcgtcatgaacagcgagacggggacgagcctcaagatccgcctgctgcaggccagc
aagcgcgaattgaaccgtgacctgacgcgggccgtcgagttcgaccagtccggcctgttc
aagaagatctacgagaacgaattcggcaccccgggcggcgagccctatggcgcgctgatc
ggcgactacgaatggaccaaccatccggatgacgtcgagacgctgcggctgatgtccaac
gtggccgccgccggcttcgcgcccttcatctcggccgccgggcctggcatgttcggtttc
tcggactaccgcgaactctccaagccgcgtgacctgtcgaagatcttcgagacgcaggaa
tacgcgaagtggcgctctttccgggatagcgaggatagccgcttcgtcaccctcgtgctg
ccgcgcgtcatcgcccgcctgccctatggcgcgaacaccaagccgattgacgaattcgcc
tatgaggaagcgcccttcaacgccgatggttccgccaaggcgatggagcacaatgagtat
tgctggatgaacgcggcctatgtgcacgccgcgcggctgaccgacgccttcgcccaatat
ggctggtgcaccgccatccgtggcgccgagggcggcggcaaggtgaccaacctgccgacg
cataccttcacttccgatgacggtgacatggacgcgaaatgcccgaccgagatcggcatc
accgaccggcgcgaggcagagctctccaacaacggcttcctgccgctctgtcactacaag
aacaccgattacagcgtgttcttcggcgcgcagacgacgcagaagcccaagaagtatgat
cgcccggaagccaccgcaaatgcggcgatttccgcccgcctgccctacatcatggcgacc
agccgcttcgcccacttcctcaaggtgatggcgcgcgacaagatcggctccttcatggag
gcgtcggattgcgaagtctggctgaaccgctggatccagaactacgtgaacccgatcgaa
ggggctggccaggaaagccgggcgaaatacccgctgcgtgaagcgaaggtcgaggtgaag
gaaattccgggcaagcccggctcctacaacgccgtcgcctatctgcggccctggttgcag
atggaggaactcaccacctccatgcgcatggtggcccgcatcccgcagaaatcctga

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