KEGG   Sediminicoccus rosea: LHU95_03315
Entry
LHU95_03315       CDS       T08103                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
srf  Sediminicoccus rosea
Pathway
srf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:srf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LHU95_03315 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:srf02044]
    LHU95_03315 (tssM)
Secretion system [BR:srf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LHU95_03315 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C
Other DBs
NCBI-ProteinID: UPY37736
UniProt: A0A9E7A9Z3
LinkDB
Position
complement(694702..698208)
AA seq 1168 aa
MRAFLSIPALAALAGVLLLDVVIWIFAPLLGEAFEALWLRGLLGLVLVLIWAGVTFMIGR
GRDKRDAGLLEAAAAPDPKAKKDEAAAEEEAELRAKLTDALGKLKNATGGKGGYLYDLPW
YAIIGPPGSGKTTALLNSGLEFPLAEGRVGGVGGTRFCDWWLTERAVLIDTAGRYTTQDS
DADADKAGWERFLDLLKKNRPRQPLNGVLVAFGMDMLARLDATQRESHARSVRRRIRELE
TRLGQRLPVYFMVTKSDLLPGFIEFFDDLDKDQRQQVWGFTFPPQTPPEGAVTQFPAEFA
ALSERLMARQIERLQNERGPSQRAMIAGFPTQFASLEAPLQAFLQSAFGGSKLDPAPFLR
GVYFTSGTQEGTPLDRLAGALSRSFGLDPARPAAAMGQKGRAYFIGRQLRDVVFNEARLA
ANDRGLESRRRMIQIGSWAAALLLVLGGGIWGWMSSGTEAAREARLAAAVTAAEQAGAGA
PLARVQSPDLAGVLAYLETNRALPPAAAGSGPGFGLSQEEMLTSGAEGAYRRALDRVLLP
RLLSRLETQIREGIQRPDFLYEAVRVYLMLGKQGPLDRALVREWFALDWQQAFPGAVNQP
GREALARHLDAMMTGTLATYPLDGALVDQARRVFSRLPMAQRVYARLRPLAENVPAWTPG
QPLGAAGQRYFARASGRPMTEGVPGLFTVEGLHRAVLPRLSQAALEAASESWVLGPEAAT
AGAADPRRMEADVLALYAADYVRAWEAMIADLVLPAFPSLNAAAEGLNLLGAPNSPMKDL
LRSIARQVSPGTAPEAPGGAAAGAAAGAVAQAAQAAAGATASRVAAAVGTALGGSGAAPV
AQVVETRFAPLREAAGAPIDGVLAILNDLYVQVARLANSPPGTVLPPSPGLDPGQRLLSE
AQRQPDPLRGWLTAISQSTGRARSGGAQAAIAAAAGGGGGGGGGALVNLCRGIETRFPFR
RQVNAPDMPVDDFIRLFAPGGVFDSFFTQNLRAYTDTTQRPWRPVATDGLPPPVSAADLA
QFQRAQAIREAFFPAGVANGFRFQLLPAGLSAGTTGATLEASGARVALPVGGGGRPIDLQ
FPALHPITLTFDPASSMGDLAYDGAWSTLKLVFLHRLTATPQPDRFRLMVERGDRRAEFV
LQAASSVNPFALRDMLEFRCPTFAPPAN
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgcgcgcttttctctccatcccggcgctggccgccctggccggcgtgttgctgctcgac
gtggtcatctggatcttcgcgccgctgctgggcgaggccttcgaggcgctctggctgcgc
ggcctgctcgggctggtgctcgtgctgatctgggcgggtgtgaccttcatgatcggccgc
gggcgggacaagcgcgacgcgggcctgctcgaagccgccgccgcccctgatccaaaggcg
aagaaggacgaggcggccgccgaggaggaggccgagcttcgcgccaagctgaccgacgcg
ttgggcaagctgaagaacgccaccggcggcaagggcggttatctgtatgacctgccctgg
tatgccatcatcggcccacccggctcgggcaagaccacggcgctgctcaattccggcctg
gaattcccgctggccgagggccgcgtcggtggtgtgggcggcacgcgcttctgcgattgg
tggctgaccgagcgcgccgtgctgatcgacacggccggccgctacaccacgcaggacagc
gacgccgatgccgacaaggccggctgggaacgcttcctcgacctgctgaagaagaaccgc
ccgcgccagcccctgaacggcgtgctggtggcctttggcatggacatgctggcgcggctc
gacgccacccagcgcgaatcccacgcccgcagcgtccgtcgccgcatccgcgagctggaa
acccggctgggccagcgcctgccggtctatttcatggtcaccaagagcgacctgctgccc
ggcttcatcgagttcttcgacgatctggacaaggatcagcgccagcaggtctggggcttc
accttcccgccccagacgccgcccgaaggcgccgtcacgcagtttccggccgagttcgcg
gccctttccgaacgcctgatggcacggcagatcgagcggctgcaaaatgagcgcggcccc
tcgcagcgcgcgatgatcgcgggcttcccgacgcaattcgcctcgctggaagcgccgttg
caggcgtttctgcaatcggcctttggtggctccaagctcgaccccgcccccttcctgcgc
ggcgtctatttcacctccggcacgcaggaggggacgccgctggatcgcctggcgggtgcg
ctctcgcgctccttcgggctggatccggcgcgcccggcggccgccatgggccagaagggc
cgcgcctatttcatcggccgccagctgcgtgacgtggtgttcaacgaagcccgcctcgcc
gccaatgaccgagggctggaatcgcgccgccgcatgatccagatcggctcctgggccgcg
gcgctgctgctggtgctgggtggcggcatctggggctggatgtcctccggcacggaagcc
gcgcgcgaggcccggcttgccgcggccgtcacggcggccgagcaggccggcgcgggggcg
ccgctggcccgcgtgcaatcgcccgatctcgctggcgtgctggcctatctggagaccaat
cgcgccctgccgcccgccgccgccggcagcggccctggcttcggcctgagccaggaggag
atgctgacctcgggcgccgagggcgcctatcgccgcgcgctggaccgcgtgctgctgccg
cgcctgctctcgcggctggaaacccagatccgcgagggcattcagcggccggatttcctc
tatgaggcggtgcgcgtctatctcatgctgggcaagcagggcccgctggaccgcgctttg
gtgcgcgagtggttcgcgctggattggcagcaggccttccccggtgcggtgaaccagccg
gggcgcgaggccctggcccgccacctggatgcgatgatgaccggcaccctggccacctat
ccgctggatggcgcgctggtggaccaggcgcggcgcgtcttctcacgcctgcccatggcg
cagcgcgtctatgcccgcctgcgtccgctcgccgagaatgtgcccgcctggacgccgggc
cagccgctgggtgccgccgggcagcgctatttcgcccgcgccagcggccggccgatgacc
gagggcgtgcccggcctgttcaccgtggaaggcctgcatcgcgccgtcctgccgcgcctc
agccaggcggcgctggaagcggccagcgaaagctgggtgctcggccccgaggccgccacc
gccggtgccgccgatccgcgccggatggaggcggatgtgctggccctctacgccgccgat
tatgtgcgcgcctgggaggcgatgatcgcggatctggtgctgcccgccttccccagcctg
aacgcggcggccgagggcctcaatctgctcggcgcgcccaacagccccatgaaggatctg
ctgcgcagcatcgcgcgccaggtctcgcccggaacggcgccggaagcgcccggtggtgcc
gcggcaggtgctgccgccggggccgtggcgcaagcggcccaggctgcggcgggggccacg
gccagccgggtcgcggccgcggtgggcacggccctggggggttcgggcgcggccccggtc
gcccaggtggtcgagacccgcttcgcgccgctgcgcgaggcggctggcgcgccgattgac
ggcgtcctcgccatcctgaacgacctttacgtgcaggtcgcgcgccttgccaattcgcca
cccggaaccgtgctgccgcccagcccgggcctggatcccgggcagcggctgctctccgag
gcgcagcgccagcctgacccgctgcgcggctggctgacggcgatttcgcaatccaccggc
cgcgcgcgttccggtggggcgcaggcggccatcgcggccgctgcgggcggtggcggtggc
ggtggcggcggcgccctggtcaatctctgccgcggcatcgagacacgcttccccttccgc
cgccaggtcaacgcgcccgacatgccggtggatgacttcatccggctattcgcgccgggc
ggcgtgttcgacagcttcttcacgcaaaatctgcgcgcctatacggacaccacccagcgg
ccctggcggccggtggcgacggatggactgccgccccccgtttcggcggcggatctcgcg
cagttccagcgcgcccaggccatccgcgaggccttcttccccgccggcgtcgccaatggc
ttccgcttccagctgctgccggccgggctttccgccggcaccaccggcgccacgctcgaa
gcctcgggcgcgcgggtggccttgccggtgggcggcggcgggcggccaatcgacctgcaa
ttcccggccctgcaccccatcaccctcaccttcgatccggcatccagcatgggcgatctc
gcttatgacggcgcctggtccacgctcaagctggtgtttctgcaccggctgaccgcaacg
ccgcagccggatcgcttccgcctgatggtcgagcggggggatcgtcgggcggaattcgtc
ctgcaggccgccagcagcgtgaatcccttcgcgctgcgcgacatgctggagttccgctgc
cccaccttcgccccccctgcgaattag

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