Sediminicoccus rosea: LHU95_03450
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Entry
LHU95_03450 CDS
T08103
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00061
Fatty acid biosynthesis
srf00071
Fatty acid degradation
srf01100
Metabolic pathways
srf01212
Fatty acid metabolism
srf02024
Quorum sensing
srf04146
Peroxisome
Module
srf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LHU95_03450
00071 Fatty acid degradation
LHU95_03450
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LHU95_03450
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_03450
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srf01004
]
LHU95_03450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srf04147
]
LHU95_03450
Enzymes [BR:
srf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LHU95_03450
Lipid biosynthesis proteins [BR:
srf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LHU95_03450
Exosome [BR:
srf04147
]
Exosomal proteins
Exosomal proteins of breast milk
LHU95_03450
Exosomal proteins of breast cancer cells
LHU95_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UPY37763
UniProt:
A0A9E7A832
LinkDB
All DBs
Position
complement(734208..735923)
Genome browser
AA seq
571 aa
AA seq
DB search
MPQTVETATSLPGLIFALAIQAPDQPMLGFWREGQWRRMSRAEFAQKVAHIAAGLRAQGI
MPGDRVLLVSENRPEFMIADNAIMAIGAVTVPTYVTNTVADHAHVLRDSGARAAIVSTRP
LAERVLQAGPLDLLVGMEELPSPPAETLALGWAELEATPADLAMLIAEVQEIPAGRLACL
IYTSGTGGNPKGVMLPHRAMLTNCVGAKGLIDRIGVRQGRYLSFLPLSHSYEHTVGGFLM
PACGYQVIFARGADKLLADFAEHRPQLITTVPRLFEVIRERIMASLEKEGGLRLRLFRRA
LALGLRKLDGPPLSLFERVQDAALDRLVRAKVRARFGGAIEALISGGARLDPELSGFFLA
LGVTVIQGYGQSEAGPVISVNLPWDNDRRSVGKPLPGVEARLAADGELLIKGGLVMDGYW
NNPEATALALRPPPGETEAWLHTGDVAELREGRIFITDRKRDFLKLKGGDMVAPSKIEAM
LAGEPEVAQAVAAGEGLAGVVALIVPAEGQAERVGEAVKRVNARLSNIERIRRFQTLSEG
FTVENGLLTPTMKIKRRQVLERYGDEVAALG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaccgtggaaacggcgacaagcctgcccgggctcatctttgccctggccatc
caggcgccggaccagcccatgctgggcttctggcgggagggccagtggcggcggatgagc
cgcgcggaattcgcgcaaaaggtcgcgcatatcgccgccgggctgcgggcgcagggcatc
atgccgggggaccgcgtgctgctggtcagcgagaaccggcccgaattcatgatcgccgac
aatgccatcatggccatcggcgccgtcaccgtgcccacctacgtgaccaacaccgtggcc
gaccacgcgcatgtgctgcgcgacagcggggcccgggcggccatcgtctcgacgcgcccg
ctggcagagcgcgtgctgcaggccggcccgctcgacctgttggtgggcatggaggaactc
ccctcgcccccggccgagacgcttgccctcggctgggccgagctggaagccaccccggcc
gacctcgcgatgctgatcgccgaggtgcaggaaatcccggcggggcgcctcgcctgcctg
atctacacctccggcacgggcggcaaccccaagggggtgatgctgccgcaccgggccatg
ctgaccaattgcgtcggcgccaaggggctgatcgaccgcatcggcgtgcggcaagggcgc
tacctctccttcctgccgctgtcgcacagctatgagcatacggtcggcggtttcctgatg
ccggcctgtggctaccaggtgatcttcgcgcgcggagcggacaagctgctggcggatttc
gccgagcaccgcccgcagctcatcaccaccgtgccgcggctgttcgaggtgatccgcgag
cgcattatggcctcgctggaaaaggagggcgggctcaggctccggctgttccgccgcgcc
ctagcgctggggctgcgcaagctggatggcccgccgctctcgctgttcgagcgcgtgcag
gatgcggcgctggaccggctggtccgcgccaaggtgcgcgcgcgcttcggcggcgcgatc
gaggcgctgatctccggcggggcgcggctcgaccccgagctttcgggctttttcctcgcc
ctcggcgtcaccgtgatccagggctatggccagagcgaggccgggcccgtgatcagcgtg
aacctgccctgggacaatgaccgccgcagcgtgggcaagccgctgcccggcgtggaagcg
cgcctcgccgcggatggcgaattgctcatcaagggcggcctcgtcatggatggctactgg
aacaatccggaggccacagcgctggccctgcgcccaccgcccggcgagaccgaggcctgg
ctgcacaccggcgatgtggcggagctgcgcgaggggcgcatcttcatcaccgaccgcaag
cgggatttcctgaagctgaagggcggcgacatggtggccccctccaagatcgaggcgatg
ctggcgggcgagccggaggtggcccaggcggtcgcggcgggcgaagggctggctggcgtc
gtcgcactcatcgtcccggccgaaggccaggcggagcgcgtgggcgaggcggtgaagcgg
gtgaatgcgcgcctctccaacatcgagcgcatccgccgcttccagaccctgtccgagggc
ttcaccgtcgagaatggcttgctgacgccgaccatgaagatcaagcggcgccaggtgctg
gaacgctacggcgatgaggtcgcggcgctgggctga
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