Sediminicoccus rosea: LHU95_04090
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Entry
LHU95_04090 CDS
T08103
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00020
Citrate cycle (TCA cycle)
srf00190
Oxidative phosphorylation
srf00650
Butanoate metabolism
srf00720
Other carbon fixation pathways
srf01100
Metabolic pathways
srf01110
Biosynthesis of secondary metabolites
srf01120
Microbial metabolism in diverse environments
srf01200
Carbon metabolism
Module
srf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srf_M00149
Succinate dehydrogenase, prokaryotes
srf_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LHU95_04090 (sdhA)
00650 Butanoate metabolism
LHU95_04090 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LHU95_04090 (sdhA)
00720 Other carbon fixation pathways
LHU95_04090 (sdhA)
Enzymes [BR:
srf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LHU95_04090 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
UPY37884
LinkDB
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Position
932562..934373
Genome browser
AA seq
603 aa
AA seq
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MNAISKPSFGAYRVVDHTYDVVVVGAGGAGLRATFGMGASGLKTACITKVFPTRSHTVAA
QGGVGAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCREAIPAVIELEHYGVPFSRT
EDGRIYQRPFGGHMKEYGKEPAMRACAAADRTGHAILHTLYQQSLKHGCEFFVEYFALDL
IMDDEGVCRGVTAWNLEDGTIHRFRAQKVVLATGGYGRAWFSCTSAHTCTGDGGGMVLRA
GLPLQDQEFVQFHPTGIYGAGCLVTEGARGEGGYLTNSQGERFMERYAPTAKDLASRDVV
SRAMSVEIREGRGCGPMKDHIMLHLEHLGADILHERLPGISETARIFAGVDVTKEPIPML
PTVHYNMGGIPTNIHTEVLRPTRADEDATVPGLMAVGEAACVSVHGANRLGTNSLLDLVV
FGRAAAHRAAETVKPGASQPPLPPRAGEGSLDRFDRIRHAKGSTGTAELRLAMQRTMQEH
AAVFRSSELLREGVEKMKGVHAGFSDLKVTDRSLVWNTDLVEALELDNLVGNAMTTIVGG
EARKESRGAHAQEDYPDRDDVNWMKHTLAWMNEKGEVKLDYRDVKMRTLTNEVQVFPPKA
RVY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccatcagcaagccatccttcggggcctatcgggtcgtggatcacacctatgac
gtggtggtggtcggcgcgggtggtgccgggttgcgcgccaccttcggcatgggcgcctcg
gggctgaaaaccgcctgcatcaccaaggtcttcccgacacgcagccacaccgtggcggcg
cagggcggcgtgggtgcggccctgggcaatatgggcgaggatgactggcgctggcacatg
tacgacaccgtgaaggggtcggactggctgggcgaccaggacgccatcgaatacatgtgc
cgcgaggccattcccgccgtcatcgagctggagcattacggcgtgcccttcagccgcacc
gaggatggccgcatctaccagcgccccttcggcggccacatgaaggaatacggcaaggag
cccgcgatgcgcgcctgcgccgcggccgaccgcaccggccacgccatcctgcacacgctg
tatcagcagtcgctcaagcatggctgcgagttcttcgtggaatacttcgcgctcgacctc
atcatggatgatgagggcgtgtgccgcggtgtgacggcctggaacctggaagacggcacc
atccaccgcttccgcgcgcagaaggtggtgctggcgacgggcggttatggccgcgcctgg
ttctcctgcacctcggcccatacctgcaccggcgatggcggcggcatggtgctgcgcgcc
ggcctgcccctgcaggaccaggaattcgtgcagttccacccgaccggcatctacggtgcc
ggctgcctcgtcaccgaaggggcccgcggcgagggcggctacctcaccaattcccagggc
gagcgcttcatggagcgctatgcaccgaccgcgaaggacctcgcctcgcgcgatgtggtg
tcccgcgccatgtccgtcgaaatccgcgaggggcgcggctgcggcccgatgaaggatcac
atcatgctccatctggagcatctgggcgccgatatcctgcatgagcgcctgcccggcatt
tccgagacggcgcgcatcttcgccggcgtggatgtgacgaaggagccgatcccgatgctc
cccaccgtgcattacaacatgggcggcatccccacgaacatccacaccgaggtgctgcgc
cccacgcgcgccgatgaggatgcgaccgtccccggcctgatggccgtgggcgaggcggcc
tgcgtctcggtgcatggcgcgaaccgcctgggtaccaattccctgctcgatctcgtggtg
ttcggccgcgccgccgcccatcgcgccgccgagacggtaaagcccggcgcgtcccagccg
ccgctgccgccgcgcgcgggtgagggcagcctggaccggttcgaccgcatccgccacgcc
aagggcagcaccggcacggccgagctgcgcctggccatgcagcgcaccatgcaggaacac
gccgccgtcttccgctcctccgaactgctgcgtgagggtgtggagaagatgaagggcgtg
catgccggcttcagcgacctcaaggtcacggatcgcagcctcgtgtggaacaccgacctg
gtggaggcgctggagctcgacaatctcgtcggcaatgcgatgacgaccatcgtgggtggt
gaggcccgcaaggaaagccgcggcgcccacgcgcaggaggattatccggatcgcgatgac
gtgaactggatgaagcacaccctggcctggatgaatgagaagggcgaggtgaagctcgat
tatcgcgatgtgaagatgcggaccctgaccaatgaggttcaggtgtttccgcccaaggcg
cgggtgtactag
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