Sediminicoccus rosea: LHU95_05305
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Entry
LHU95_05305 CDS
T08103
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_05305
Transporters [BR:
srf02000
]
Other transporters
Pores ion channels [TC:
1
]
LHU95_05305
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Ortholog
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GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
Motif
Other DBs
NCBI-ProteinID:
UPY38115
UniProt:
A0A9E7DB50
LinkDB
All DBs
Position
complement(1192490..1193656)
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AA seq
388 aa
AA seq
DB search
MNQFKTSLMLGAAAIALPLAAGAQPAPRSAFDNFRLAPQQTVTGLYIGAGAGVNFLENST
LNSNNTLATGLAARGVAGRGQAIFEPGFVGVFSIGYGFGNGLRIEAEGNFRQNDIDKVGG
FRGAGFTNTAGGMQRSYGAMANMLYDFRIPGVTWMVPYIGGGVGYVWRDMHGLSVSAPGG
VSLRSSDIDGRFAYQAIGGAAFPIASVPGLAVTAEYRYLGTQPTDLNTRLVNTTNGRVIG
GGTLRSSDNNHSVLVGLRYAFNQAPAPVPVAAVAAAPAPARTYLVFFDWDRADLTDRARQ
IIGDAATNARTVASTRIEVSGHADRTGTAAYNQRLSVRRAEAVAGELVRRGVARNEITIQ
GFGFDRPLVATAMGVREPQNRRVEIVLR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcaagaccagcctgatgcttggcgccgcggcgatcgcgcttcccctggcg
gccggcgcgcagcccgccccgcgcagcgccttcgacaatttccgcctggccccccagcaa
accgtgaccggcctctacatcggcgcgggtgccggcgtgaatttcctggagaacagcacg
ctcaacagcaataacaccctggccaccgggctggccgcgcgcggcgttgccggccgtggc
caggcgatcttcgagcccggcttcgtcggcgtcttctcgatcggctatggcttcggcaac
ggcctgcgcatcgaggcggagggcaatttccgccagaatgacattgacaaggtgggcggc
ttccgtggcgcgggcttcaccaacacggcgggcggcatgcagcgcagctacggcgccatg
gccaatatgctctatgatttccgcatcccgggcgtgacctggatggtgccctatatcggc
ggcggcgtgggctatgtctggcgtgacatgcatgggctttcggtcagcgcgccgggcggc
gtctcgctccgctccagcgatattgacgggcgcttcgcctaccaggccatcggtggcgcg
gccttcccgatcgcttccgtccccggcctcgccgtcacggccgagtatcgctacctcggc
acccagccgacggatctgaacacccgcctcgtcaacacgaccaatggccgggtgatcggc
ggcggcacattgcgcagctcggacaacaaccactccgtgcttgtgggcctgcgctatgcc
ttcaaccaggcgccggcccctgtgccggtggcggccgtcgccgccgccccggcgccggcc
cgcacctacctcgtcttcttcgactgggatcgcgcggacctgaccgaccgtgcgcgccag
atcatcggcgatgccgccaccaatgcacggaccgtggcctcgacccgcatcgaggtttcg
ggccatgcggaccgcaccgggacggccgcctacaaccagcgcctctcggtgcgtcgtgcc
gaagcggtagcgggcgagctggtccgtcgtggcgtcgcgcggaacgagatcaccatccag
ggcttcggcttcgaccgccccctggtggcaacggccatgggcgtgcgtgagccgcagaac
cgccgggtggaaatcgtgctgcgctga
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