Sediminicoccus rosea: LHU95_06720
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Entry
LHU95_06720 CDS
T08103
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srf03032
]
LHU95_06720
03036 Chromosome and associated proteins [BR:
srf03036
]
LHU95_06720
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_06720
DNA replication proteins [BR:
srf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LHU95_06720
Chromosome and associated proteins [BR:
srf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LHU95_06720
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LHU95_06720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
VWA_3
SNRNP27
Urease_beta
DUF1163
Motif
Other DBs
NCBI-ProteinID:
UPY38383
UniProt:
A0A9E7AK91
LinkDB
All DBs
Position
1492663..1492935
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQDLVAVVAETGELSKAKAGDVLDSVFEAIMKALKKKQEVRLVGFGTFSTSKRKAGKG
RNPRTGEEIKIPASTTVRFKAGKNLKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatctcgttgccgttgtcgccgagacgggcgaattgtcgaaggcgaag
gccggagatgtgctcgactcggtgttcgaggcgatcatgaaggcgctgaagaagaagcag
gaagtccgcctcgtcggcttcggcaccttcagcaccagcaagcgtaaggccggcaagggc
cgcaacccgcgcacgggcgaggaaatcaagatccccgcttcgacgaccgtccggttcaag
gccggcaagaacctcaaggaagccgtgaactaa
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