Sediminicoccus rosea: LHU95_08065
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Entry
LHU95_08065 CDS
T08103
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
srf
Sediminicoccus rosea
Pathway
srf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LHU95_08065 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_08065 (uvrB)
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHU95_08065 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LHU95_08065 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
SWI2_SNF2
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
UPY39317
LinkDB
All DBs
Position
1774512..1776692
Genome browser
AA seq
726 aa
AA seq
DB search
MPPAGKPLRVVSPFEPNGDQPTAIRELIAGVQGNERDQVLLGVTGSGKTFTMAKVIEAVQ
RPTLVLAPNKTLAAQLYGEMKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSQINE
QIDRMRHSATQSLLERRDVVIVASVSCIYGIGSVETYSNMVVKLEVGGSISRDALLKGLV
EQQYRRNDMAFQRGSFRVRGESVDVWPAQLEDRAWRINLFGDDIESLREFDPLTGEITGE
FERVSIYANSHYVTPRPTMQQAIGRIKAELKEHLLILEKEGKLLEAQRLDQRTTFDIEMM
ETTGSCKGIENYSRYLSGRNPGEPPPTLFEYLPEGALLVVDESHVTVPQIGGMYKGDYAR
KIILSEYGFRLPSCTDNRPLKFEEWESFRPQTVFVSATPGPWEMERTGGVFAEQVIRPTG
LVDPVCDIRPVENQVDDLLAECKACAAKGERVLVTVLTKKMAEQLTEYLTEMGVRVRYLH
SDVDTLERIEIIRDLRRGVFDALIGINLLREGLDIPECGLVTILDADKEGFLRSTTSLIQ
TIGRAARNAEGRVILYADRMTDSMKRALEETERRRNKQIAYNTEHGITPTSIKREISDVL
RDVSQGDYVTVEAVEGDATAQFVGRDLRSAIAEMEKKMRAAAADLEFETAARLRDEIKRL
EALELDIATPGSAPSGSALTPNEAGRSLREATPKKDWKPKPMGPGGGGYDPKKMKARGGS
RGRSGP
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccggcaagccgttgcgcgtggtcagccccttcgagccgaatggcgaccag
cccaccgccatccgcgaactcatcgccggcgtgcagggcaatgagcgggaccaggtgctg
ctgggtgtcacgggctcgggcaagaccttcaccatggcgaaggtgatcgaggcggtgcag
cgtcccaccttggtgctggcgcccaacaagaccctggccgcgcaactctacggcgagatg
aagagcttcttccccgacaacgcggtggaatatttcgtcagctactacgactattaccag
cccgaagcctatgtgccgcgcaccgacacctatatcgaaaaagacagccagatcaacgag
cagattgaccgcatgcggcactctgccacgcaatccctgctggagcggcgggatgtggtg
atcgtggccagcgtctcctgcatctacggcatcggctcggtcgagacctattccaacatg
gtggtgaagctggaagtggggggcagcatctcccgcgatgcgctgctgaagggcctggtc
gagcagcaatatcgccgcaatgacatggccttccagcgcggcagcttccgggtgcggggc
gagagcgtggatgtctggcccgcgcagctggaggatcgcgcctggcgcatcaacctcttt
ggcgacgacatcgaatccctgcgcgaattcgacccgctgaccggcgaaatcaccggcgag
ttcgagcgcgtgagcatctacgccaacagccactacgtgacgccgcggccgacgatgcag
caggccatcggccgcatcaaggcggagctgaaggagcacctgctgatcctggaaaaggag
ggcaagctgctggaagcccagcgcctggaccagcgcaccaccttcgatatcgagatgatg
gagaccaccggctcctgcaagggaatcgagaattattcccgctatctctccggccggaat
ccgggcgaaccgccgccgacgctgttcgaatatctgcccgagggcgcgttgctggtggtg
gatgaaagccacgtcaccgtgccgcagatcggcggcatgtataagggcgactatgcgcgc
aagatcatcctcagcgaatacggcttccgcctgccgagctgcacagataaccgcccgctg
aaattcgaggagtgggagagtttccgcccgcagaccgtcttcgtcagcgccacccccggc
ccctgggaaatggagcgcaccggcggcgtcttcgccgagcaggtgatccgtccgaccggc
cttgtggaccccgtctgcgacatccgccctgtggaaaatcaggtggatgacctgctggcc
gagtgcaaggcctgcgccgccaagggcgagcgcgtgctggtcacggtgctgaccaagaag
atggccgagcaactcaccgaatacctgacggaaatgggcgtgcgcgtgcgctacctccat
tccgatgtggacacgctggagcgcatcgagatcatccgcgacctgcgccgcggcgtgttc
gacgcgctgatcggcatcaacctgctgcgcgaggggctggatattcccgaatgcggcctc
gtgaccatcctggacgcggataaggaaggcttcctgcgctccaccacctcgctcatccag
accatcggccgggcggcccgcaatgccgaaggccgcgtcatcctctacgccgaccgcatg
accgacagcatgaagcgcgccctggaggagacggagcggcggcgcaacaagcaaatcgcc
tacaacactgagcacggcatcacccccacctccatcaagcgggagatcagcgatgtgctg
cgcgatgtgagccagggcgactacgtgacggtggaggcggtggagggcgatgcgacggcg
caattcgtcggccgtgacctgcgctcggccatcgccgagatggagaagaagatgcgcgcg
gcggcggccgacctggaattcgagacggcggcccggctgcgcgacgagatcaagcggctg
gaggcgctggaactggacatcgccacgccgggcagcgccccatcgggcagcgcgctgaca
cccaatgaggccgggcgttccctgcgtgaggcgacgcccaagaaggactggaagcccaag
cccatggggccagggggcgggggctatgacccgaagaagatgaaggcccgcgggggaagc
cgcgggcggtcggggccgtga
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