Sediminicoccus rosea: LHU95_08235
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Entry
LHU95_08235 CDS
T08103
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
srf
Sediminicoccus rosea
Pathway
srf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_08235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_08235
Transporters [BR:
srf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LHU95_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UPY38672
LinkDB
All DBs
Position
complement(1808417..1809457)
Genome browser
AA seq
346 aa
AA seq
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MVQITRRQGALLGAGMLAAPAIANAQANRISVSVWGGSWRDMVQNIIARKFTADTGATVE
FQTGGTIDRLNRARLARGNPESDLNFTTSHIGWLYQNDGLYETLDMSKIPNAANLVEQAK
ISPGHIGTWAYVYTIGYRPDLLPGVSFGSWADLWSPALVNKLAAPDFDPSHIMVVAAILE
GGDAATWERGQARLRALRPNFRAFYTNDANSQQLIASGETPVQVILSMNAHHMASQGVNL
RLAIPREGAVLGVDCVSIMRGSRRQELAYQFVNTCLDPQIQAAIAADKKGSPTVTNAVLD
PAVAALPGVFTTPEQWRTQALVIDHRLRAEKTNEWRRWFQENIIAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcactcgccggcaaggtgcccttctgggcgccggaatgctcgcagcgcct
gccatcgccaatgcccaggccaaccgcatttccgtctccgtctggggcggctcctggcgg
gacatggtgcagaacatcatcgcccggaaattcactgccgatacgggtgcgaccgtcgag
ttccagaccggcggcacgattgaccggctgaaccgcgcgcgcctggcccgcggcaatccc
gagagtgatctgaacttcaccacctcgcatatcggctggctctatcagaatgacgggctc
tacgagacgctcgacatgtcgaagatccctaacgccgccaatctggtggagcaggcgaag
atcagcccagggcatatcggcacctgggcctatgtctacaccatcggctaccggcctgat
ctgctgcccggcgtgagcttcggctcctgggccgatctctggtcccccgcgctggtgaac
aagctggcggcaccggatttcgacccctcgcacatcatggtggtcgctgccatcctggaa
ggcggcgatgccgcgacctgggagcgcggccaggcccggctgcgcgcgctgcgccccaat
ttccgcgccttctacaccaatgacgcgaacagccagcagctgatcgcctcgggcgagacg
ccggtgcaggtcatcctctcgatgaacgcgcaccacatggcctcgcaaggtgtcaatctg
cgcctcgcgatcccgcgtgagggcgcggtgctgggggtggattgcgtctccatcatgcgc
ggcagccgccggcaggagctggcctatcaattcgtgaacacctgcctcgatccgcaaatc
caggcagccatcgcggcggacaagaagggcagccccaccgtgaccaatgcggtgctggac
ccggccgtggccgccctgcccggcgtgttcaccacgcccgagcaatggcgcacccaggca
ctggtgattgaccaccgcctgcgcgccgaaaagaccaatgaatggcgccgctggttccag
gaaaacatcatcgcgcgctga
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