Sediminicoccus rosea: LHU95_08820
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Entry
LHU95_08820 CDS
T08103
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
srf
Sediminicoccus rosea
Pathway
srf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_08820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_08820
Transporters [BR:
srf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LHU95_08820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
G7C_C
Motif
Other DBs
NCBI-ProteinID:
UPY38783
UniProt:
A0A9E7AA15
LinkDB
All DBs
Position
complement(1922635..1923684)
Genome browser
AA seq
349 aa
AA seq
DB search
MTLHSLPRRGVLTLALSAPFIGNAHAQAGEVIVRNPGGAYEDTMRRVVYEPFTRATGVRV
TSVAATAARLLAMFRSGNVELDVIDAGDSVLEQLRRQNALADLDYGSWRLTKPEDVDTSV
KFPTRVGNLLYASVIGYSKETFPNAHPTNWAEFWDTTRFPGPRTLADMATGSPNLEFALL
ADGVPMDRLYPLDMERAFRSLDRIRRSVPKFWDTGALSAQMLADKEVVLGSFWNGRVQVL
IDRGAPLGIDWGQAMIEVQAASIFRGARNAANAQRLIDFMMQPAVQAEYCRELTYGPTNN
QAFALLPAEQLARMPGSPASRAQGFYKSIDWWEDNRAAVNRRWSRWILG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcattcccttccccgccgtggcgtgctcacgctggcgctttctgcacctttc
atcggcaatgcccatgcgcaggcgggcgaggtgatcgtccgcaatccgggtggcgcctat
gaagatacgatgcgccgcgtggtctatgagcccttcacccgcgccaccggcgtgcgcgtc
acctccgtcgccgccacggcggcacggctgctcgccatgttccgctcgggcaatgtggag
ctggacgtgattgacgcgggcgacagcgtgcttgaacagctgcgccgccagaatgccctg
gcggatctggattacggcagctggcgcctgaccaagcctgaggatgtggatacctcggtg
aaattccccacccgcgtcggcaacctgctttatgcttcggtcatcggctacagcaaggag
acgtttcccaacgcccacccaacgaattgggcggaattctgggacacgacgcgcttcccc
gggccacgcaccctcgccgacatggcgaccggctcgcccaatctcgaattcgcgctgctg
gccgatggcgtgccgatggaccggctctatccgctcgatatggagcgcgccttccgcagc
ctcgaccgcattcgccgcagcgttccgaaattctgggataccggcgcgctctccgcgcag
atgctggcggacaaggaggttgtgctcggctccttctggaatggccgcgtgcaggtgctg
atcgaccgtggcgcgccgctgggcattgattggggccaggccatgatcgaagtgcaagcg
gcgagcatctttcgcggcgcgcgcaacgcggcgaatgcccagcggctgatcgacttcatg
atgcagcccgcggtgcaggcggaatattgccgcgagctgacctacggcccgaccaataac
caggccttcgcgctgctgccggccgagcaattggcccgcatgccgggcagccccgcctcc
cgcgcgcaaggcttctacaagagcattgattggtgggaggataaccgggccgccgtgaat
cgccgctggtcgcgctggattctcggttga
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