KEGG   Sediminicoccus rosea: LHU95_09060
Entry
LHU95_09060       CDS       T08103                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
srf  Sediminicoccus rosea
Pathway
srf00010  Glycolysis / Gluconeogenesis
srf00020  Citrate cycle (TCA cycle)
srf00260  Glycine, serine and threonine metabolism
srf00280  Valine, leucine and isoleucine degradation
srf00310  Lysine degradation
srf00380  Tryptophan metabolism
srf00620  Pyruvate metabolism
srf00630  Glyoxylate and dicarboxylate metabolism
srf00640  Propanoate metabolism
srf00670  One carbon pool by folate
srf00785  Lipoic acid metabolism
srf01100  Metabolic pathways
srf01110  Biosynthesis of secondary metabolites
srf01120  Microbial metabolism in diverse environments
srf01200  Carbon metabolism
srf01210  2-Oxocarboxylic acid metabolism
srf01240  Biosynthesis of cofactors
Module
srf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
srf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
srf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:srf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LHU95_09060 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LHU95_09060 (lpdA)
   00620 Pyruvate metabolism
    LHU95_09060 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LHU95_09060 (lpdA)
   00640 Propanoate metabolism
    LHU95_09060 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LHU95_09060 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LHU95_09060 (lpdA)
   00310 Lysine degradation
    LHU95_09060 (lpdA)
   00380 Tryptophan metabolism
    LHU95_09060 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LHU95_09060 (lpdA)
   00670 One carbon pool by folate
    LHU95_09060 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srf04147]
    LHU95_09060 (lpdA)
Enzymes [BR:srf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LHU95_09060 (lpdA)
Exosome [BR:srf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LHU95_09060 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA DAO FAD_oxidored NAD_binding_8 HI0933_like FAD_binding_2 FAD_binding_3 3HCDH_N 2-Hacid_dh_C AlaDh_PNT_C Lys_Orn_oxgnase Trp_halogenase Thi4
Other DBs
NCBI-ProteinID: UPY38827
UniProt: A0A9E7AGS2
LinkDB
Position
1972132..1973526
AA seq 464 aa
MAEAFDVVVVGGGPGGYVAAIRASQLKMKVALVERENLGGICLNWGCIPTKALLRASEIN
HLLHSLDQFGFAADNVRFDFAKVIKRSRGVASQLSGGVKHLLKKNKVTVFDGHGALAGPG
KIAVTKDGKPVAELAAKHILLATGARARVIPGMEPDGKLIWSYREAMTPSALPKKLIVVG
SGAIGSEFASFYLNMGAEVTLVEVMDRVLPVEDAEISVFVRKAFEKQGMKIITNARVQGV
RKGADDVTAVIEADGKVTELKADRLISAVGIVGNVENLGLEGTKIVVDRTHIVTDAMGRT
GEPGVYAFGDVTGAPWLAHKASHEGIICVENIAGLHPHAMDVLNIPGCTYCRPQVASVGL
TEARAKELGHEVRVGRFPFIGNGKAIAMGEPEGFVKTVFDAKTGELLGAHMVGPEVTEMI
QGYGIARTLETTEADLMHTVFPHPTVSEAMHESVLDAYGRVIHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggccgaggcatttgacgtggtggtggtgggcggcgggcctggcggctatgtggccgcc
atccgcgcctcgcaactcaagatgaaggtggcgctggtcgagcgtgaaaaccttggcggc
atctgcctgaactggggctgcatcccgaccaaggcgctgctgcgcgccagcgagatcaac
cacctgctgcacagcctcgatcaattcggctttgccgcggataatgtgcgcttcgatttt
gccaaggtgatcaagcgctcgcgcggcgtggccagccagctttcgggcggcgtgaagcat
ctgctgaagaagaacaaggtcacggtgtttgacgggcatggcgcgctggccgggccgggc
aagatcgccgtcaccaaggatggcaagcccgtggcggagctcgccgcgaagcacatcctg
ctggcaacgggtgcgcgcgcgcgcgtcattcccggcatggagccggatggcaagctcatc
tggtcctaccgcgaggcgatgacgcccagcgccctgcccaaaaagctcatcgtcgtcggc
tcgggcgccatcggctccgagtttgccagcttctatctcaacatgggggccgaggtgacc
ctcgttgaggtgatggaccgcgtgctgccggtcgaagatgccgagatcagcgtcttcgtg
cgcaaggcgtttgagaagcagggcatgaagatcatcaccaatgcccgcgtccagggtgtc
cgcaagggtgcggatgacgtgacggccgtgatcgaggccgatggcaaggtgacggaactc
aaggcggaccgtctgatttccgccgtcggcattgtcggcaatgtcgagaatctgggcctt
gagggcacgaagatcgtcgtggaccgcacgcatatcgtgaccgacgccatgggccgcacc
ggtgagcctggcgtctatgcctttggcgatgtgaccggcgccccctggctggcgcacaag
gcgagccatgagggcatcatctgcgtcgagaatatcgcggggctgcatccgcatgcgatg
gatgtgctgaacatccccggctgcacctattgccgcccgcaggtcgcctcggtggggctg
accgaggcgcgcgccaaggagctgggccatgaggtgcgcgtcggccgcttccccttcatc
ggcaatggcaaggcgatcgcgatgggcgagccggagggcttcgtgaagaccgtcttcgat
gccaagaccggcgaattgctgggcgcgcacatggtcggccccgaggtgacggagatgatt
cagggctatggcatcgcccgcacgctggaaaccaccgaggcggatctcatgcacaccgtc
ttcccgcacccgacggtgagcgaggcgatgcatgagagcgtgctcgacgcctatggcaga
gtcattcacatctag

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